RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 PTNP21246 168 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 RYKP34925 604 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 RAC3P60763 192 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 VSNL1P62760 191 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 BSPH1Q075Z2 132 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 ITGADQ13349 1161 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 CLEC12BQ2HXU8 276 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 NCMAPQ5T1S8 102 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 ADAM5Q6NVV9 412 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 RIMKLAQ8IXN7 391 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 SLC43A2Q8N370 569 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 KBTBD8Q8NFY9 601 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 LILRB1Q8NHL6 650 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 SMAP2Q8WU79 429 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 XAGE5Q8WWM1 108 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 RAB8BQ92930 207 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 TRMT61AQ96FX7 289 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 OR51I1Q9H343 314 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 SERINC1Q9NRX5 453 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 LGALS13Q9UHV8 139 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 ZANQ9Y493 2812 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 A0A1W2PP18 115 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 ITM2AO43736 263 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 STX11O75558 287 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 SOX30O94993 753 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 IGHV3-9P01782 118 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 SOD3P08294 240 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 OR12D1P0DN82 309 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 EDNRAP25101 427 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 SERPINB5P36952 375 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 CLDN8P56748 225 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 SESN3P58005 492 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 EMX2Q04743 252 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 MAD2L1Q13257 205 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 P2RY6Q15077 328 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 TNFAIP8L2Q6P589 184 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 LSRQ86X29 649 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 UBE2J2Q8N2K1 259 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF563Q8TA94 476 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 DPY30Q9C005 99 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 LAT2Q9GZY6 243 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 EXD2Q9NVH0 621 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 NOP53Q9NZM5 478 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 KCNE5Q9UJ90 142 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 LIPT1Q9Y234 373 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 CADP27708 2225 aa15.59■□□□□ 0.09
SHKBP1-223ENST00000600552 DPRXA6NFQ7 191 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 DUXAA6NLW8 204 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 SULT2B1O00204 365 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 SMAD9O15198 467 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 FESP07332 822 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 NUDT17P0C025 328 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 OR3A2P47893 321 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 CHI3L2Q15782 390 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 ATAD3BQ5T9A4 648 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 C3orf33Q6P1S2 294 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 EIF3MQ7L2H7 374 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 MUCL1Q96DR8 90 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 PSD2Q9BQI7 771 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 POTEKPQ9BYX7 375 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 AKTIPQ9H8T0 292 aa15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 ING1Q9UK53 422 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 MAGED1Q9Y5V3 778 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-223ENST00000600552 ESPNB1AK53 854 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 RAMP1O60894 148 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 UGT2B17O75795 530 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 PAX1P15863 534 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 PGCP20142 388 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 IDUAP35475 653 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 CHI3L1P36222 383 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 DIO1P49895 249 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 NME5P56597 212 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 SKP2Q13309 424 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 PPA1Q15181 289 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF141Q15928 474 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 MAPK14Q16539 360 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ARHGAP11BQ3KRB8 267 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF672Q499Z4 452 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 SLC25A53Q5H9E4 307 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 Q6ZT83 130 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 GALNT5Q7Z7M9 940 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF781Q8N8C0 355 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 PIWIL2Q8TC59 973 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 TMEM234Q8WY98 164 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 MDFIQ99750 246 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ROPN1BQ9BZX4 212 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 NMUR2Q9GZQ4 415 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 CENPHQ9H3R5 247 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ALG2Q9H553 416 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 ROPN1Q9HAT0 212 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 BCO1Q9HAY6 547 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 GP6Q9HCN6 339 aa15.57■□□□□ 0.08
SHKBP1-223ENST00000600552 A0A1W2PR80 420 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 CYTIPO60759 359 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 AK1P00568 194 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 ACVR1BP36896 505 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 C21orf58P58505 322 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 CHRNEQ04844 493 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms