RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ANKUB1	A6NFN9	424 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	FAM47E-STBD1	D6RA91	191 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	GMFG	O60234	142 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	FKBP6	O75344	327 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	IFNA8	P32881	189 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	RYK	P34925	604 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	COPZ1	P61923	177 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	TOMM20	Q15388	145 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	LACC1	Q8IV20	430 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR4D11	Q8NGI4	311 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	ARSG	Q96EG1	525 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	C7orf34	Q96L11	122 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	MCHR1	Q99705	422 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	AMBRA1	Q9C0C7	1298 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	AP4S1	Q9Y587	144 aa		19.92	■□□□□ 0.78
LTBP4-227	ENST00000600026	hCG_2039718	K7EN88	272 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	FMO6P	O60774	539 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	TRAPPC6A	O75865	159 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	HPN	P05981	417 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	SRD5A2	P31213	254 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF136	P52737	540 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	HSF1	Q00613	529 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	SLC10A1	Q14973	349 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	KRTCAP3	Q53RY4	240 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	RBM45	Q8IUH3	476 aa	Known RBP	19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	PAPD5	Q8NDF8	572 aa	Known RBP	19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	ST6GALNAC3	Q8NDV1	305 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF563	Q8TA94	476 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	WFDC6	Q9BQY6	131 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	CHID1	Q9BWS9	393 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	TRIM2	Q9C040	744 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	OR2B2	Q9GZK3	357 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	POLR2J2	Q9GZM3	115 aa	Known RBP	19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	POLR2J3	Q9H1A7	115 aa	Known RBP	19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	SLC6A15	Q9H2J7	730 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	TMEM27	Q9HBJ8	222 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	PLSCR2	Q9NRY7	297 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	RPS6KB2	Q9UBS0	482 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	DKKL1	Q9UK85	242 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	ENPP4	Q9Y6X5	453 aa		19.91	■□□□□ 0.78
LTBP4-227	ENST00000600026	SVIL	O95425	2214 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	FAAH	O00519	579 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	IGHG3	P01860	377 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	PRG2	P13727	222 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ACAA2	P42765	397 aa	Known RBP	19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF41	P51814	821 aa	Predicted RBP	19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	VLDLR	P98155	873 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	HOXC5	Q00444	222 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	NPTX1	Q15818	432 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	IGFBP7	Q16270	282 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	AAGAB	Q6PD74	315 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	PLEKHM3	Q6ZWE6	761 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	PIWIL3	Q7Z3Z3	882 aa	Known RBP	19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	GHDC	Q8N2G8	530 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	FAM83F	Q8NEG4	500 aa	Predicted RBP	19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	GPR119	Q8TDV5	335 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	PYDC1	Q8WXC3	89 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	SLCO4A1	Q96BD0	722 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	C1GALT1C1	Q96EU7	318 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF300	Q96RE9	604 aa	Predicted RBP	19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF347	Q96SE7	839 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	KLHDC3	Q9BQ90	382 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ACKR4	Q9NPB9	350 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ARMC1	Q9NVT9	282 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	ZNF407	Q9C0G0	2248 aa		19.9	■□□□□ 0.78
LTBP4-227	ENST00000600026	HNRNPR	O43390	633 aa	Known RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	RHCE	P18577	417 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	DPP4	P27487	766 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	MAGEA2	P43356	314 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	IDH2	P48735	452 aa	Known RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	DSCR4	P56555	118 aa	Predicted RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	FOXK1	P85037	733 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	GANAB	Q14697	944 aa	Known RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	WIPI1	Q5MNZ9	446 aa	Predicted RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	GFRAL	Q6UXV0	394 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	TRIL	Q7L0X0	811 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	YRDC	Q86U90	279 aa	Known RBP	19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	CADM2	Q8N3J6	435 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	TMEM234	Q8WY98	164 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	S100A14	Q9HCY8	104 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	TAS2R10	Q9NYW0	307 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026	SELENON	Q9NZV5	590 aa		19.89	■□□□□ 0.77
LTBP4-227	ENST00000600026		A0A087WZY1	265 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	TRGV5	A0A0B4J1U4	118 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	CPSF4L	A6NMK7	179 aa	Known RBP	19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026		J3QKU1	62 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	MT-ND1	P03886	318 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	FCGR1A	P12314	374 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	GP1BB	P13224	206 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	TAS2R41	P59536	307 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR1Q1	Q15612	314 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	ENTPD8	Q5MY95	495 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	WBP2NL	Q6ICG8	309 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	LSMEM1	Q8N8F7	131 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	OR14L1P	Q8NHC6	308 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	PRRC1	Q96M27	445 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	LDAH	Q9H6V9	325 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	EXO5	Q9H790	373 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	NDUFAF4	Q9P032	175 aa		19.88	■□□□□ 0.77
LTBP4-227	ENST00000600026	MRPS18C	Q9Y3D5	142 aa	Known RBP	19.88	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms