RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CPLX4Q7Z7G2 160 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 SERPINA11Q86U17 422 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 PEX5LQ8IYB4 626 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 UBQLNLQ8IYU4 475 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 TMCO5AQ8N6Q1 288 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 OR8J3Q8NGG0 315 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 ST8SIA1Q92185 356 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 RND1Q92730 232 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 SDCCAG3Q96C92 435 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 ZNF845Q96IR2 970 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 ACER3Q9NUN7 267 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 USP22Q9UPT9 525 aa17.54■□□□□ 0.4
SHKBP1-221ENST00000599833 A0A0J9YW62 118 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 FAAHO00519 579 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 CYP7B1O75881 506 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 IL7RP16871 459 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 CHRNB4P30926 498 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 CCR4P51679 360 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 SMSP52788 366 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 GNA13Q14344 377 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 PLEKHM3Q6ZWE6 761 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 ACBD4Q8NC06 268 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 RELL2Q8NC24 303 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 OR10A6Q8NH74 314 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 LILRB4Q8NHJ6 448 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 FIG4Q92562 907 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 WFDC6Q9BQY6 131 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 SPATA9Q9BWV2 254 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 TMEM185BQ9H7F4 350 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 COQ10BQ9H8M1 238 aa17.53■□□□□ 0.4
SHKBP1-221ENST00000599833 MPDZO75970 2070 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 ITPR2Q14571 2701 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 C19orf84I3L1E1 186 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 SEC14L5O43304 696 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 TPST1O60507 370 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 CLDN14O95500 239 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 NUDT14O95848 222 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 OPN1LWP04000 364 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 PRG2P13727 222 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 PGCP20142 388 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 RBBP4Q09028 425 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 FOXF2Q12947 444 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 GUSBP1Q15486 140 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 GLIPR1L2Q4G1C9 344 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 LILRA2Q8N149 483 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 HIPK4Q8NE63 616 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 WNT2BQ93097 391 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 ZNF583Q96ND8 569 aa17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 GMPR2Q9P2T1 348 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 KLF2Q9Y5W3 355 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-221ENST00000599833 MFN2O95140 757 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 RCBTB2O95199 551 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 TACC2O95359 2948 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 GKN3PP0CG01 181 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 COL8A1P27658 744 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 PRKAR1BP31321 381 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 DHRS4L2Q6PKH6 230 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 MEIOBQ8N635 442 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 SMPDL3BQ92485 455 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 CCT8L2Q96SF2 557 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 UCK2Q9BZX2 261 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 ADAM19Q9H013 955 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 CMTM6Q9NX76 183 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 IFT52Q9Y366 437 aa17.51■□□□□ 0.39
SHKBP1-221ENST00000599833 AKAP9Q99996 3911 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 FAM47E-STBD1D6RA91 191 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 FRS3O43559 492 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 RYKP34925 604 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 PCGF2P35227 344 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 SLC6A8P48029 635 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 IDH2P48735 452 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 DMTNQ08495 405 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 SELENBP1Q13228 472 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 MMEL1Q495T6 779 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF311Q5JNZ3 666 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 FAM91A1Q658Y4 838 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ESPNLQ6ZVH7 1005 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ADGRG3Q86Y34 549 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ANKS4BQ8N8V4 417 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 PCYOX1LQ8NBM8 494 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 C11orf65Q8NCR3 313 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 GPR32P1Q8NGA4 272 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 OR10D3Q8NH80 312 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 OR2V1Q8NHB1 315 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 FNDC9Q8TBE3 224 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ASB5Q8WWX0 329 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 KLHL15Q96M94 604 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 PINK1Q9BXM7 581 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 SRXN1Q9BYN0 137 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 CTPS2Q9NRF8 586 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ARL2BPQ9Y2Y0 163 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 ZNF175Q9Y473 711 aa17.5■□□□□ 0.39
SHKBP1-221ENST00000599833 PKDREJQ9NTG1 2253 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 TMEM247A6NEH6 219 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 CFAP73A6NFT4 308 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 TMEM229AB2RXF0 380 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 C5orf58C9J3I9 102 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 EIF1AYO14602 144 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 TNFSF11O14788 317 aa17.49■□□□□ 0.39
SHKBP1-221ENST00000599833 TNFSF13O75888 250 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms