RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ADAM5Q6NVV9 412 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 ZCCHC23Q6ZST2 131 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 OLIG3Q7RTU3 272 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 OR5AK3PQ8NH89 298 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 GPR119Q8TDV5 335 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.33
IRF3-223ENST00000599223 ACTRT3Q9BYD9 372 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 HHATLQ9HCP6 504 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 FGFR1OP2Q9NVK5 253 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 PRSS50Q9UI38 385 aa13.02□□□□□ -0.33
IRF3-223ENST00000599223 EBAG9O00559 213 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 SMAD9O15198 467 aaKnown RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 PEX11AO75192 247 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 NDUFS7O75251 213 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 HSPA4LO95757 839 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 CHEK2O96017 543 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 ADAP00813 363 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 P2RX1P51575 399 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 CLEC12BQ2HXU8 276 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 PGGHGQ32M88 737 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 R3HCC1LQ7Z5L2 792 aaKnown RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 TMCO5AQ8N6Q1 288 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 ZNF614Q8N883 585 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 CCDC197Q8NCU1 140 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 KISS1RQ969F8 398 aaPredicted RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 FBXW5Q969U6 566 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 ZNF300Q96RE9 604 aaPredicted RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 QRSL1Q9H0R6 528 aaKnown RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 FANCFQ9NPI8 374 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 TRAF6Q9Y4K3 522 aa13.01□□□□□ -0.33
IRF3-223ENST00000599223 GPC6Q9Y625 555 aaPredicted RBP13.01□□□□□ -0.33
IRF3-223ENST00000599223 DPRXA6NFQ7 191 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
IRF3-223ENST00000599223 NPHS1O60500 1241 aa13□□□□□ -0.33
IRF3-223ENST00000599223 EDF1O60869 148 aaKnown RBP13□□□□□ -0.33
IRF3-223ENST00000599223 TMCC2O75069 709 aa13□□□□□ -0.33
IRF3-223ENST00000599223 SKAP2O75563 359 aaPredicted RBP13□□□□□ -0.33
IRF3-223ENST00000599223 LYZL6O75951 148 aa13□□□□□ -0.33
IRF3-223ENST00000599223 IGHV4-39P01824 125 aa13□□□□□ -0.33
IRF3-223ENST00000599223 SERPINE1P05121 402 aa13□□□□□ -0.33
IRF3-223ENST00000599223 CD3EP07766 207 aa13□□□□□ -0.33
IRF3-223ENST00000599223 THBS1P07996 1170 aa13□□□□□ -0.33
IRF3-223ENST00000599223 FGF4P08620 206 aa13□□□□□ -0.33
IRF3-223ENST00000599223 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
IRF3-223ENST00000599223 ADH6P28332 368 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ACVR1BP36896 505 aa13□□□□□ -0.33
IRF3-223ENST00000599223 CCR4P51679 360 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ATP12AP54707 1039 aa13□□□□□ -0.33
IRF3-223ENST00000599223 FAPQ12884 760 aa13□□□□□ -0.33
IRF3-223ENST00000599223 SKP2Q13309 424 aa13□□□□□ -0.33
IRF3-223ENST00000599223 QPRTQ15274 297 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ZNF672Q499Z4 452 aaPredicted RBP13□□□□□ -0.33
IRF3-223ENST00000599223 SLC25A53Q5H9E4 307 aa13□□□□□ -0.33
IRF3-223ENST00000599223 GTF2IRD2BQ6EKJ0 949 aa13□□□□□ -0.33
IRF3-223ENST00000599223 SPATA21Q7Z572 469 aa13□□□□□ -0.33
IRF3-223ENST00000599223 GTF2IRD2Q86UP8 949 aa13□□□□□ -0.33
IRF3-223ENST00000599223 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ZNF527Q8NB42 609 aa13□□□□□ -0.33
IRF3-223ENST00000599223 OR56A1Q8NGH5 318 aa13□□□□□ -0.33
IRF3-223ENST00000599223 RFWD2Q8NHY2 731 aa13□□□□□ -0.33
IRF3-223ENST00000599223 SFXN5Q8TD22 340 aa13□□□□□ -0.33
IRF3-223ENST00000599223 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
IRF3-223ENST00000599223 REXO5Q96IC2 774 aaKnown RBP13□□□□□ -0.33
IRF3-223ENST00000599223 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
IRF3-223ENST00000599223 OR7D2Q96RA2 312 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ELAC2Q9BQ52 826 aaKnown RBP13□□□□□ -0.33
IRF3-223ENST00000599223 TRIM2Q9C040 744 aa13□□□□□ -0.33
IRF3-223ENST00000599223 BCO1Q9HAY6 547 aa13□□□□□ -0.33
IRF3-223ENST00000599223 GP6Q9HCN6 339 aa13□□□□□ -0.33
IRF3-223ENST00000599223 NPAP1Q9NZP6 1156 aa13□□□□□ -0.33
IRF3-223ENST00000599223 LIPT1Q9Y234 373 aa13□□□□□ -0.33
IRF3-223ENST00000599223 DTNAQ9Y4J8 743 aa13□□□□□ -0.33
IRF3-223ENST00000599223 ALPK2Q86TB3 2170 aa13□□□□□ -0.33
IRF3-223ENST00000599223 GJE1A6NN92 205 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 TMEM114B3SHH9 223 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 C9JVG2 144 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 RAMP1O60894 148 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 CRLF1O75462 422 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 PRKD3O94806 890 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
IRF3-223ENST00000599223 YES1P07947 543 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 UBL4AP11441 157 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 OR3A2P47893 321 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 HBA1P69905 142 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 DMTNQ08495 405 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 SPDYE7PQ495Y7 208 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 PDZK1Q5T2W1 519 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 DNM1P46Q6ZS02 220 aa12.99□□□□□ -0.33
IRF3-223ENST00000599223 CXXC5Q7LFL8 322 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms