RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 OR12D1P0DN82 309 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 GSK3BP49841 420 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ANXA11P50995 505 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 CORO7P57737 925 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 DSTNP60981 165 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 FUT5Q11128 374 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNF155Q12901 538 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 C6orf52Q5T4I8 152 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 TNFAIP8L2Q6P589 184 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 FAM110BQ8TC76 370 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ADAMTS15Q8TE58 950 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 IGFBPL1Q8WX77 278 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 NTNG2Q96CW9 530 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 REXO5Q96IC2 774 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 LCORQ96JN0 433 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 DOHHQ9BU89 302 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 UGT2B28Q9BY64 529 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 MMADHCQ9H3L0 296 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ALG2Q9H553 416 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 QPCTLQ9NXS2 382 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 ADA2Q9NZK5 511 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
SHKBP1-218ENST00000598907 GUSBP08236 651 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 ARAFP10398 606 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 CCKARP32238 428 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 GABRA3P34903 492 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 PSPHP78330 225 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 RBBP4Q09028 425 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNHIT3Q15649 155 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 ARHGAP11BQ3KRB8 267 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 GCNT6Q5T4J0 391 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 METTL25Q8N6Q8 603 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 CDS1Q92903 461 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 RAB8BQ92930 207 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 OTUB1Q96FW1 271 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 WDYHV1Q96HA8 205 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNF597Q96LX8 424 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 BTBD2Q9BX70 525 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 USP22Q9UPT9 525 aa12.5□□□□□ -0.41
SHKBP1-218ENST00000598907 GXYLT2A0PJZ3 443 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 A8MXE2 369 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ACOX3O15254 700 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 GPRIN2O60269 458 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 AK1P00568 194 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 CYP4B1P13584 511 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 PGM1P36871 562 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ACVR1BP36896 505 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 VMACQ2NL98 169 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNF791Q3KP31 576 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 CYP27C1Q4G0S4 372 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 HLA-DQA1Q5Y7H0 255 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 VASNQ6EMK4 673 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ERICH5Q6P6B1 374 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ZNF704Q6ZNC4 412 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SLC44A2Q8IWA5 706 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 MICU2Q8IYU8 434 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SLC38A5Q8WUX1 472 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 XAGE5Q8WWM1 108 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 PIK3R3Q92569 461 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 JADE3Q92613 823 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 CLPTM1LQ96KA5 538 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SDF2Q99470 211 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 TUBA1CQ9BQE3 449 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 SAP130Q9H0E3 1048 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 Q9N2J8 555 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 EXD2Q9NVH0 621 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 LAMP3Q9UQV4 416 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 LIPT1Q9Y234 373 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 TGP01266 2768 aa12.49□□□□□ -0.41
SHKBP1-218ENST00000598907 ELOVL7A1L3X0 281 aa12.48□□□□□ -0.41
SHKBP1-218ENST00000598907 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
SHKBP1-218ENST00000598907 H0Y3Z8 333 aa12.48□□□□□ -0.41
SHKBP1-218ENST00000598907 GCM2O75603 506 aaPredicted RBP12.48□□□□□ -0.41
SHKBP1-218ENST00000598907 KCNK2O95069 426 aa12.48□□□□□ -0.41
SHKBP1-218ENST00000598907 IGKV1D-16P01601 117 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms