RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TNFSF11O14788 317 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 SLC22A2O15244 555 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 EFNA2O43921 213 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 TOXO94900 526 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 PABPC4LP0CB38 370 aaKnown RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 BMP2P12643 396 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 HTR1EP28566 365 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 SHC1P29353 583 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 CHRNB4P30926 498 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 EIF1P41567 113 aaKnown RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 SESN3P58005 492 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 RAC1P63000 192 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 HSPB2Q16082 182 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 TMEM44Q2T9K0 475 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 TMEM176BQ3YBM2 270 aaPredicted RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 RABL3Q5HYI8 236 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 PDSS1Q5T2R2 415 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 RIPPLY2Q5TAB7 128 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 HBMQ6B0K9 141 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 SP5Q6BEB4 398 aaPredicted RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 LSRQ86X29 649 aaPredicted RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 KRT73Q86Y46 540 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 CMIPQ8IY22 773 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 GCNT2Q8N0V5 402 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 CLIP4Q8N3C7 705 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 OIT3Q8WWZ8 545 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 PMM1Q92871 262 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 INTS12Q96CB8 462 aaKnown RBP9.98□□□□□ -0.81
LIG1-211ENST00000596457 ZNF607Q96SK3 696 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 SPATA9Q9BWV2 254 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 TMEM38AQ9H6F2 299 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 ARMC7Q9H6L4 198 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 CTPS2Q9NRF8 586 aa9.98□□□□□ -0.81
LIG1-211ENST00000596457 PRRC2CQ9Y520 2896 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 A0A1W2PNR3 127 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 C7orf72A4D263 438 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CFAP73A6NFT4 308 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CD8B2A6NJW9 211 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SLC22A20A6NK97 555 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 HNRNPRO43390 633 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 FRS3O43559 492 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CXCL13O43927 109 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SYNGR4O95473 234 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 TGM6O95932 706 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 OPN1SWP03999 348 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 TMIGD3P0DMS9 266 aaPredicted RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 TFPIP10646 304 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 BMP5P22003 454 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PSMA4P25789 261 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 GRNP28799 593 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 TIMP3P35625 211 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SLC6A8P48029 635 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 EEF1A1P68104 462 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 HOXC5Q00444 222 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PLAURQ03405 335 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PON3Q15166 354 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 ADRM1Q16186 407 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PRAMEF8Q5VWM4 474 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PRAMEF7Q5VXH5 474 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 AP1ARQ63HQ0 302 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PLEKHM3Q6ZWE6 761 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 GGNQ86UU5 652 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 PTOV1Q86YD1 416 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 LIX1LQ8IVB5 337 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 ZZZ3Q8IYH5 903 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CADM2Q8N3J6 435 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 METTL25Q8N6Q8 603 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 C11orf65Q8NCR3 313 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 NAXEQ8NCW5 288 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 HIPK4Q8NE63 616 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 FAM71CQ8NEG0 241 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 OR10D3Q8NH80 312 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 OR2V1Q8NHB1 315 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SLC26A7Q8TE54 656 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 FIG4Q92562 907 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 OSTF1Q92882 214 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 KLHL15Q96M94 604 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 SPATA5L1Q9BVQ7 753 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 KAT8Q9H7Z6 458 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 BCL2L10Q9HD36 194 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CHST11Q9NPF2 352 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 KCNJ16Q9NPI9 418 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 EXOSC3Q9NQT5 275 aaKnown RBP9.97□□□□□ -0.81
LIG1-211ENST00000596457 SERINC1Q9NRX5 453 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 ACER3Q9NUN7 267 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CLCF1Q9UBD9 225 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 USP22Q9UPT9 525 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 ARL2BPQ9Y2Y0 163 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 DSPPQ9NZW4 1301 aa9.97□□□□□ -0.81
LIG1-211ENST00000596457 CELSR2Q9HCU4 2923 aa9.96□□□□□ -0.81
LIG1-211ENST00000596457 CDHR4A6H8M9 788 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.82
LIG1-211ENST00000596457 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
LIG1-211ENST00000596457 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms