RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DNAJB12Q9NXW2 375 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-212ENST00000596163 MCTS1Q9ULC4 181 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-212ENST00000596163 NCOA6Q14686 2063 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-212ENST00000596163 LOC100653049A0A140TA62 436 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 NKX2-6A6NCS4 301 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 CLDN24A6NM45 220 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 H0YC42 278 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 FAAHO00519 579 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 HNRNPRO43390 633 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 KRT34O76011 436 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 NTN1O95631 604 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 PABPC4LP0CB38 370 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 COX6B1P14854 86 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 GRNP28799 593 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 LSP1P33241 339 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF136P52737 540 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 SEC24CP53992 1094 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 MERTKQ12866 999 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 SCARB2Q14108 478 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 PON3Q15166 354 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 CYP51A1Q16850 503 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 TRMT5Q32P41 509 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 TMEM176BQ3YBM2 270 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 RPS26P11Q5JNZ5 115 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 RNF220Q5VTB9 566 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 GTF2IRD2BQ6EKJ0 949 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 GRINAQ7Z429 371 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 GTF2IRD2Q86UP8 949 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 VRK2Q86Y07 508 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 LIX1LQ8IVB5 337 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC30A8Q8IWU4 369 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 NAXEQ8NCW5 288 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 OR10D3Q8NH80 312 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 NFKBIDQ8NI38 313 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 RP9Q8TA86 221 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 INTS12Q96CB8 462 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 REXO5Q96IC2 774 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 NPAS1Q99742 590 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 SPOCK3Q9BQ16 436 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 TMEM185BQ9H7F4 350 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC24A3Q9HC58 644 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 ANGPT4Q9Y264 503 aa15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF443Q9Y2A4 671 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-212ENST00000596163 PHF3Q92576 2039 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 COL12A1Q99715 3063 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 A0A0J9YW62 118 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 CDHR4A6H8M9 788 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 FBP2O00757 339 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 MRASO14807 208 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SERPINB7O75635 380 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 TGM6O95932 706 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 OPN1LWP04000 364 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC7A1P30825 629 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SFTPDP35247 375 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 PEX19P40855 299 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 IDH2P48735 452 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 ASCL1P50553 236 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 DLX5P56178 289 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 COPZ1P61923 177 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 GNGT1P63211 74 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 PPP4R4Q6NUP7 873 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 C3orf33Q6P1S2 294 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF836Q6ZNA1 936 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 PLEKHM3Q6ZWE6 761 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SNX32Q86XE0 403 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 C11orf65Q8NCR3 313 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 HIPK4Q8NE63 616 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 ATP6V1C2Q8NEY4 427 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 BHLHE22Q8NFJ8 381 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC25A43Q8WUT9 341 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 FIG4Q92562 907 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 OSTF1Q92882 214 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC35B4Q969S0 331 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 LRRC58Q96CX6 371 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 ADGRG7Q96K78 797 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 FAM107BQ9H098 131 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 PIGMQ9H3S5 423 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 FOXD3Q9UJU5 478 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-212ENST00000596163 PRORSD1PA6NEY8 169 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 TNFSF11O14788 317 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 EFNA2O43921 213 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 CXCL13O43927 109 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 IL11P20809 199 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 CLK1P49759 484 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 MAP2K6P52564 334 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 MTPNP58546 118 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 EPS8Q12929 822 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 CTU2Q2VPK5 515 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 REP15Q6BDI9 236 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 HIST2H2BCQ6DN03 193 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 SERPINA11Q86U17 422 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 OR8J3Q8NGG0 315 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 FNDC9Q8TBE3 224 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 CPNE4Q96A23 557 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF845Q96IR2 970 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 RNF122Q9H9V4 155 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 GLRX2Q9NS18 164 aa15.52■□□□□ 0.08
SHKBP1-212ENST00000596163 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms