RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 EI24O14681 340 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 OIP5O43482 229 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ITGB2P05107 769 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ANXA8P13928 327 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 WT1P19544 449 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 PGCP20142 388 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 HTR2AP28223 471 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 CASRP41180 1078 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 CASP3P42574 277 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 LIMS1P48059 325 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 IDH2P48735 452 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 CYB561P49447 251 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 HLCSP50747 726 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 P2RX1P51575 399 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ALDH3A2P51648 485 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 FOXK1P85037 733 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 OC90Q02509 493 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 SNTA1Q13424 505 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 DGCR6Q14129 220 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 PODNL1Q6PEZ8 512 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 BEST3Q8N1M1 668 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 LINC00471Q8N535 108 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 LSMEM1Q8N8F7 131 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 FAM71CQ8NEG0 241 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 OR10G2Q8NGC3 310 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 OR5W2Q8NH69 310 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 DNAJC9Q8WXX5 260 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 BARD1Q99728 777 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ING2Q9H160 280 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ANKRD19PQ9H560 264 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 CNIH4Q9P003 139 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 PPP4R1LQ9P1A2 415 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 KIF17Q9P2E2 1029 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC7A7Q9UM01 511 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 ORC6Q9Y5N6 252 aa11.92□□□□□ -0.5
SHKBP1-209ENST00000595803 PCSK5Q92824 1860 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 TRBV4-1A0A0J9YWV2 114 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 EFSO43281 561 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 GMFGO60234 142 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 NUDT14O95848 222 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 HPRP00739 348 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 P04436 131 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 SFTPCP11686 197 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 ELAVL4P26378 380 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 MSX1P28360 303 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 IFNGR2P38484 337 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CCL11P51671 97 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 AQP4P55087 323 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 SOX8P57073 446 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 IL1RL1Q01638 556 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 PLAURQ03405 335 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF117Q03924 483 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CDC20Q12834 499 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 SKP2Q13309 424 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CBFBQ13951 182 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 AGAP7PQ5VUJ5 663 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 ULK3Q6PHR2 472 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CBLN3Q6UW01 205 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF730Q6ZMV8 503 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 TSPYL5Q86VY4 417 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 APLFQ8IW19 511 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 PAQR8Q8TEZ7 354 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 DNAJA4Q8WW22 397 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 HS6ST2Q96MM7 605 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 AGAP4Q96P64 663 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 UTP23Q9BRU9 249 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF556Q9HAH1 456 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 USE1Q9NZ43 259 aa11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-209ENST00000595803 CENPEQ02224 2701 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 A0A1B0GWA3 101 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 SH3PXD2BA1X283 911 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 OR10H3O60404 316 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ADAM11O75078 769 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 POU3F2P20265 443 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 FUT4P22083 530 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 PTGDSP41222 190 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 HSPA13P48723 471 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 RAD23AP54725 363 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 GAS1P54826 345 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 SUMO3P55854 103 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ALG10BQ5I7T1 473 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF468Q5VIY5 522 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ANKRD34AQ69YU3 496 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 BICRALQ6AI39 1079 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 OR5M10Q6IEU7 315 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 TMEM81Q6P7N7 255 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ISLR2Q6UXK2 745 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 LINC00696Q6ZRV3 163 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 NKAIN4Q8IVV8 208 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms