RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 KBTBD8Q8NFY9 601 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 TCP10LQ8TDR4 215 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 ST8SIA1Q92185 356 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 GTPBP3Q969Y2 492 aaKnown RBP21.19■□□□□ 0.98
LSM4-202ENST00000593564 TRIM2Q9C040 744 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 LAT2Q9GZY6 243 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 SERHL2Q9H4I8 314 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 LGALS13Q9UHV8 139 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 PRSS50Q9UI38 385 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 LIPT1Q9Y234 373 aa21.19■□□□□ 0.98
LSM4-202ENST00000593564 A0A1W2PP18 115 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 ZNF724A8MTY0 619 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 RNF223E7ERA6 249 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 CRLF1O75462 422 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 H6PDO95479 791 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 FESP07332 822 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 THBS1P07996 1170 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 SOAT1P35610 550 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 RPS26P62854 115 aaKnown RBP21.18■□□□□ 0.98
LSM4-202ENST00000593564 TUBGCP3Q96CW5 907 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 OR5B2Q96R09 309 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 THUMPD3Q9BV44 507 aaKnown RBP21.18■□□□□ 0.98
LSM4-202ENST00000593564 KCNE5Q9UJ90 142 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 FBN3Q75N90 2809 aa21.18■□□□□ 0.98
LSM4-202ENST00000593564 SPAG7O75391 227 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 STX11O75558 287 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 LYZL6O75951 148 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 NUDT17P0C025 328 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 G6PDP11413 515 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 MATN1P21941 496 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 CDKN1AP38936 164 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 SESN3P58005 492 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 DMTNQ08495 405 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 PPA1Q15181 289 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 GPR68Q15743 365 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 PGGHGQ32M88 737 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 HEPHL1Q6MZM0 1159 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 SSX8Q7RTT4 187 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 C6orf120Q7Z4R8 191 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 ZNF75CPQ92670 426 aaPredicted RBP21.17■□□□□ 0.98
LSM4-202ENST00000593564 ZNF300Q96RE9 604 aaPredicted RBP21.17■□□□□ 0.98
LSM4-202ENST00000593564 REG4Q9BYZ8 158 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 QRSL1Q9H0R6 528 aaKnown RBP21.17■□□□□ 0.98
LSM4-202ENST00000593564 SLCO5A1Q9H2Y9 848 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 SERINC1Q9NRX5 453 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 ASIC5Q9NY37 505 aa21.17■□□□□ 0.98
LSM4-202ENST00000593564 FCMRO60667 390 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 COX5AP20674 150 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 EDNRAP25101 427 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 CLDN8P56748 225 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 MAD2L1Q13257 205 aaPredicted RBP21.16■□□□□ 0.98
LSM4-202ENST00000593564 STK11Q15831 433 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 ARHGAP11BQ3KRB8 267 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 MAPK1IP1LQ8NDC0 245 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 TMEM234Q8WY98 164 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 TRAF4Q9BUZ4 470 aaPredicted RBP21.16■□□□□ 0.98
LSM4-202ENST00000593564 ZNF350Q9GZX5 532 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 ACER3Q9NUN7 267 aa21.16■□□□□ 0.98
LSM4-202ENST00000593564 FBN1P35555 2871 aaKnown RBP21.15■□□□□ 0.98
LSM4-202ENST00000593564 CENPVL1A0A0U1RR11 272 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 RNF103-CHMP3A0A140T963 221 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 C9JVG2 144 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 UGT2B17O75795 530 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 CYP7B1O75881 506 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 IGHV4-39P01824 125 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 BPGMP07738 259 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 PGCP20142 388 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 DIO1P49895 249 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 EMX2Q04743 252 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 FAPQ12884 760 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 PGS1Q32NB8 556 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 TIMM23BQ5SRD1 257 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 TMPPEQ6ZT21 453 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 EIF3MQ7L2H7 374 aaKnown RBP21.15■□□□□ 0.98
LSM4-202ENST00000593564 GALNT5Q7Z7M9 940 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 P2RY8Q86VZ1 359 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 CLECL1Q8IZS7 167 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 SLC25A43Q8WUT9 341 aaPredicted RBP21.15■□□□□ 0.98
LSM4-202ENST00000593564 ZNF775Q96BV0 537 aaPredicted RBP21.15■□□□□ 0.98
LSM4-202ENST00000593564 MUCL1Q96DR8 90 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 SLC35G5Q96KT7 338 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 GRIP2Q9C0E4 1043 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 NOP53Q9NZM5 478 aaKnown RBP21.15■□□□□ 0.98
LSM4-202ENST00000593564 MKLN1Q9UL63 735 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 ABCA1O95477 2261 aa21.15■□□□□ 0.98
LSM4-202ENST00000593564 RNASET2O00584 256 aaKnown RBP21.14■□□□□ 0.97
LSM4-202ENST00000593564 CSTAP01040 98 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 UBTFL6P0CB48 400 aaPredicted RBP21.14■□□□□ 0.97
LSM4-202ENST00000593564 GGT1P19440 569 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 IGHV1-2P23083 117 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 ACVR1BP36896 505 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 CSNK2A1P68400 391 aaPredicted RBP21.14■□□□□ 0.97
LSM4-202ENST00000593564 MERTKQ12866 999 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 SMU1Q2TAY7 513 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 SYT14P1Q58G82 188 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 ABLIM2Q6H8Q1 611 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 OR4F3Q6IEY1 312 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 DNM1P46Q6ZS02 220 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 DTX2Q86UW9 622 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 ZNF100Q8IYN0 542 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms