RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FFAR1O14842 300 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SLC19A2O60779 497 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 ZG16O60844 167 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 CIB2O75838 187 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 NUDT14O95848 222 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 STSP08842 583 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 CCNA2P20248 432 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 ENDOUP21128 410 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 GDF1P27539 372 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 CLK3P49761 638 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 B3GALT5-AS1P59052 145 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 PPIAP62937 165 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SELENOWP63302 87 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 RBPJQ06330 500 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 GANABQ14697 944 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 TOMM20Q15388 145 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SPATS1Q496A3 300 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 IFI44LQ53G44 452 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 KRTCAP3Q53RY4 240 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 CMPK2Q5EBM0 449 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 WIPI1Q5MNZ9 446 aaPredicted RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 PLXDC2Q6UX71 529 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 WDR88Q6ZMY6 472 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 TRILQ7L0X0 811 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 PACS2Q86VP3 889 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 MEX3DQ86XN8 651 aaKnown RBP8.73□□□□□ -1.01
DDX39A-220ENST00000593008 TNIP2Q8NFZ5 429 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 OR1J4Q8NGS1 313 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 GPR119Q8TDV5 335 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 CANT1Q8WVQ1 401 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 PYDC1Q8WXC3 89 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 C1GALT1C1Q96EU7 318 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SLC47A1Q96FL8 570 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 C7orf34Q96L11 122 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SPATA5L1Q9BVQ7 753 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 LAT2Q9GZY6 243 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SPRR3Q9UBC9 169 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 DKKL1Q9UK85 242 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 AURKCQ9UQB9 309 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SLC35A3Q9Y2D2 325 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SLC6A5Q9Y345 797 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 IFT52Q9Y366 437 aa8.73□□□□□ -1.01
DDX39A-220ENST00000593008 SPTBN1Q01082 2364 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 A0A1B0GUH1 482 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 A0A1B0GWA3 101 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 DHRS12A0PJE2 317 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 CFAP73A6NFT4 308 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 WIPF3A6NGB9 483 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 H0YC42 278 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 H3BNH8 94 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 H3BNX3 289 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 SYT5O00445 386 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 CCL21O00585 134 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 EFNA2O43921 213 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PIP5K1CO60331 668 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 ZIC3O60481 467 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 TRAPPC6AO75865 159 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 KRT36O76013 467 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 SNX4O95219 450 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 CLDN1O95832 211 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 C8BP07358 591 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 LINGO3P0C6S8 592 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PEPDP12955 493 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PRKCAP17252 672 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 HK1P19367 917 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 KLK2P20151 261 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 DPP4P27487 766 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 COL8A1P27658 744 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 ADH7P40394 386 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 IDH2P48735 452 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 STARP49675 285 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 P2RX1P51575 399 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 TPD52P55327 224 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 ACTR3P61158 418 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 C17orf67Q0P5P2 114 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 TRAP1Q12931 704 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 SNTA1Q13424 505 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PIN1Q13526 163 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PLPPR5Q32ZL2 321 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 C3P1Q6ZMU1 363 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 NCCRP1Q6ZVX7 275 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 FKBP9P1Q75LS8 142 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 FGD2Q7Z6J4 655 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 FAM83FQ8NEG4 500 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 OR5W2Q8NH69 310 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 GEMIN6Q8WXD5 167 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PROX1Q92786 737 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 PYURFQ96I23 114 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 RSRC1Q96IZ7 334 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 LRGUKQ96M69 825 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 RNF145Q96MT1 663 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 MCHR1Q99705 422 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 MMADHCQ9H3L0 296 aaPredicted RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 MUC13Q9H3R2 512 aa8.72□□□□□ -1.01
DDX39A-220ENST00000593008 CACYBPQ9HB71 228 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 EXOSC3Q9NQT5 275 aaKnown RBP8.72□□□□□ -1.01
DDX39A-220ENST00000593008 MAN2C1Q9NTJ4 1040 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms