RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CSMD2Q7Z408 3487 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 C2orf92A0A1B0GVN3 265 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ATP6AP2A0A1C7CYW4 349 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 A0A1W2PPM1 405 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 CCDC151A5D8V7 595 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 OR6C76A6NM76 312 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 MANBAO00462 879 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 UBFD1O14562 309 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 TRIM3O75382 744 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 ATP6AP2O75787 350 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SUPT7LO94864 414 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SHBGP04278 402 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 CPMP14384 443 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 COX6B1P14854 86 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 PORP16435 677 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 IMPDH1P20839 514 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 GPX3P22352 226 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 NR4A1P22736 598 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ATP5F1P24539 256 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 PTGER4P35408 488 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ARL3P36405 182 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 FEN1P39748 380 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 DIO1P49895 249 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 MAPK12P53778 367 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 NUP107P57740 925 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 FBXW4P57775 412 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 TFF3Q07654 80 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 PMPCAQ10713 525 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 TP53BP2Q13625 1128 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SLC10A1Q14973 349 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SMN1Q16637 294 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 TIGD2Q4W5G0 525 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 LGSNQ5TDP6 509 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 FNDC7Q5VTL7 733 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SLC29A4Q7RTT9 530 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 PAGE2Q7Z2X7 111 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ZNF551Q7Z340 670 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 GALNT5Q7Z7M9 940 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 CCDC71Q8IV32 467 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 PRR22Q8IZ63 422 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 FBXW8Q8N3Y1 598 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 OR5M9Q8NGP3 310 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 MTBPQ96DY7 904 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 L3HYPDHQ96EM0 354 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 C11orf24Q96F05 449 aaPredicted RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 ZNF681Q96N22 645 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 KCNA7Q96RP8 456 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SMC6Q96SB8 1091 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ZNF382Q96SR6 550 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ACPTQ9BZG2 426 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 UCK2Q9BZX2 261 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 NXF5Q9H1B4 397 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.82□□□□□ -1.328e-8■□□□□ 9.4
VMP1-213ENST00000591877 GAR1Q9NY12 217 aaKnown RBP6.82□□□□□ -1.32
VMP1-213ENST00000591877 NKIRAS2Q9NYR9 191 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 AHSPQ9NZD4 102 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 MAT2BQ9NZL9 334 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 CNIH4Q9P003 139 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SPRR3Q9UBC9 169 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 HEY2Q9UBP5 337 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 FETUBQ9UGM5 382 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 TBK1Q9UHD2 729 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 SNX6Q9UNH7 406 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 MED12Q93074 2177 aa6.82□□□□□ -1.32
VMP1-213ENST00000591877 PCNX3Q9H6A9 2034 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 TRGV5A0A0B4J1U4 118 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 C1orf226A1L170 272 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 NKX2-6A6NCS4 301 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 VWC2LB2RUY7 222 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 G3V2L1 256 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 GTPBP1O00178 669 aaKnown RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 ERAL1O75616 437 aaKnown RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 TOXO94900 526 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 MBPP02686 304 aaPredicted RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 ATP1B1P05026 303 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 EGR2P11161 476 aaPredicted RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 TAC1P20366 129 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 NT5EP21589 574 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 PCSK6P29122 969 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 RPS6KA3P51812 740 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 MVDP53602 400 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 CDH15P55291 814 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 FOXA1P55317 472 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 KRTAP10-9P60411 292 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 TRA2BP62995 288 aaKnown RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 KCNJ2P63252 427 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 EXOSC7Q15024 291 aaKnown RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 RASA2Q15283 850 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 LTB4RQ15722 352 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 TRMT12Q53H54 448 aaKnown RBP6.81□□□□□ -1.32
VMP1-213ENST00000591877 TMEM211Q6ICI0 200 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 ANKRD16Q6P6B7 361 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 GPRIN3Q6ZVF9 776 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 PXKQ7Z7A4 578 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 CPLX4Q7Z7G2 160 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 LCA5Q86VQ0 697 aa6.81□□□□□ -1.32
VMP1-213ENST00000591877 DND1Q8IYX4 353 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms