RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 FNDC5Q8NAU1 212 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 OR2M3Q8NG83 312 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 OR6K3Q8NGY3 331 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 FNDC9Q8TBE3 224 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 C16orf78Q8WTQ4 265 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 FIG4Q92562 907 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 C1GALT1C1Q96EU7 318 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ZC3HAV1LQ96H79 300 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 GMPPAQ96IJ6 420 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 OR10A4Q9H209 315 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 C1orf21Q9H246 121 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 LRTM1Q9HBL6 345 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 NGBQ9NPG2 151 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 SIRT5Q9NXA8 310 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 MED11Q9P086 117 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF337Q9Y3M9 751 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 OR2M5A3KFT3 312 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PIP5K1BO14986 540 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 SHOXO15266 292 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 FADS1O60427 444 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 SEC22BO75396 215 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 STAMBPO95630 424 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 IL33O95760 270 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 CGAP01215 116 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 IL6P05231 212 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 IFI6P09912 130 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PAX1P15863 534 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF17P17021 662 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PRPS1L1P21108 318 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ME2P23368 584 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PTH2RP49190 550 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PSG6Q00889 435 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF763Q0D2J5 394 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 C2orf80Q0P641 193 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 CYLC2Q14093 348 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PRSS53Q2L4Q9 553 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 EXOC3L2Q2M3D2 409 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 LSM12Q3MHD2 195 aaKnown RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 UGT3A2Q3SY77 523 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 XKR7Q5GH72 579 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 NPSR1Q6W5P4 371 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 MSANTD1Q6ZTZ1 278 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF550Q7Z398 422 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ARPINQ7Z6K5 226 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 OR7G2Q8NG99 324 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 AGR3Q8TD06 166 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 DUSP19Q8WTR2 217 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 TRMT61AQ96FX7 289 aaKnown RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 APIPQ96GX9 242 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 REXO5Q96IC2 774 aaKnown RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 NSL1Q96IY1 281 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 SH3GL1Q99961 368 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 SPATA9Q9BWV2 254 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 HDHD5Q9BXW7 423 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 ACPTQ9BZG2 426 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 C20orf27Q9GZN8 174 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 RMND5AQ9H871 391 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 EFCAB1Q9HAE3 211 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PLSCR4Q9NRQ2 329 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 GID8Q9NWU2 228 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 TAS2R7Q9NYW3 318 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 TAGLN3Q9UI15 199 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 C19orf53Q9UNZ5 99 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-226ENST00000591534 NDUFAF1Q9Y375 327 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 FIS1Q9Y3D6 152 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 PTGDR2Q9Y5Y4 395 aa8.46□□□□□ -1.06
BRCA1-226ENST00000591534 MPDZO75970 2070 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 FREM3P0C091 2139 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 TRIM64A6NGJ6 449 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 TRIM64BA6NI03 449 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 MYO1GB0I1T2 1018 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 SDHDO14521 159 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF195O14628 629 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ANGPT2O15123 496 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 NME6O75414 186 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 SKAP2O75563 359 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 HPGDP15428 266 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 HOXB6P17509 224 aaKnown RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 IL11P20809 199 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 CD247P20963 164 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 EPHA3P29320 983 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 GATA4P43694 442 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 RFX3P48380 749 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF41P51814 821 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ATP5J2P56134 94 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 PRR5P85299 388 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 MMEL1Q495T6 779 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 PDCD4Q53EL6 469 aaKnown RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 CLEC6AQ6EIG7 209 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 C6orf89Q6UWU4 347 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 TMEM107Q6UX40 140 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 C16orf89Q6UX73 402 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms