RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NTN1O95631 604 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 PLAUP00749 431 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 LAMP1P11279 417 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 LBPP18428 481 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 EPHA3P29320 983 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 CCT3P49368 545 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 P2RX1P51575 399 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ATP12AP54707 1039 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 EMX2Q04743 252 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 MAD2L1Q13257 205 aaPredicted RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 CAPRIN1Q14444 709 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 LASP1Q14847 261 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF239Q16600 458 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 LSM12Q3MHD2 195 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SLC25A53Q5H9E4 307 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SFRP5Q5T4F7 317 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 AP1ARQ63HQ0 302 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 CBLN3Q6UW01 205 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 DNAJC14Q6Y2X3 702 aaPredicted RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF527Q8NB42 609 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 STEAP2Q8NFT2 490 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 FBXO30Q8TB52 745 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 GPR119Q8TDV5 335 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 TMEM171Q8WVE6 324 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ROBO4Q8WZ75 1007 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 CDS1Q92903 461 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 THOC1Q96FV9 657 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 PERPQ96FX8 193 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SH3YL1Q96HL8 342 aaPredicted RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ACTRT3Q9BYD9 372 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 MEAF6Q9HAF1 191 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SLCO1B3Q9NPD5 702 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 HAO1Q9UJM8 370 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 FREM1Q5H8C1 2179 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 USF3Q68DE3 2245 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TRIM64A6NGJ6 449 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TRIM64BA6NI03 449 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TRPC5OSA6NMA1 111 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 H3BNH8 94 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 OVOL3O00110 214 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 HDAC3O15379 428 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 CFLARO15519 480 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 EIF4E2O60573 245 aaKnown RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 PRKD3O94806 890 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 YES1P07947 543 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 KRT16P08779 473 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 SHC1P29353 583 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 C21orf58P58505 322 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 RAC3P60763 192 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF117Q03924 483 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 FOXF1Q12946 379 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 P2RY6Q15077 328 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 SLC9B1Q4ZJI4 515 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ARSJQ5FYB0 599 aaPredicted RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TMEM201Q5SNT2 666 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 PPP4R4Q6NUP7 873 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TFAP2EQ6VUC0 442 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TUSC5Q8IXB3 177 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 RIMKLAQ8IXN7 391 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 KIRREL3Q8IZU9 778 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 SLC43A2Q8N370 569 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 OR56A1Q8NGH5 318 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 LILRB1Q8NHL6 650 aaPredicted RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 FBXO27Q8NI29 283 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 PHOSPHO1Q8TCT1 267 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ADAMTS15Q8TE58 950 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ABHD3Q8WU67 409 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 HSD17B8Q92506 261 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 JADE3Q92613 823 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 MOAP1Q96BY2 351 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF524Q96C55 264 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 OTUB1Q96FW1 271 aaPredicted RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 REXO5Q96IC2 774 aaKnown RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 MRGPRX4Q96LA9 322 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 PRPF18Q99633 342 aaKnown RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 SRXN1Q9BYN0 137 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 DPY30Q9C005 99 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 CXorf56Q9H5V9 222 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TMEM185BQ9H7F4 350 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 CXorf36Q9H7Y0 433 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 BCO1Q9HAY6 547 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 ATAD3AQ9NVI7 634 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 KLHL13Q9P2N7 655 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 FAF1Q9UNN5 650 aaPredicted RBP9.25□□□□□ -0.93
VPS4B-207ENST00000591519 CARD8Q9Y2G2 431 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 SNX8Q9Y5X2 465 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 KCNE3Q9Y6H6 103 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 HIVEP2P31629 2446 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 TLN2Q9Y4G6 2542 aa9.25□□□□□ -0.93
VPS4B-207ENST00000591519 JMJD1CQ15652 2540 aa9.24□□□□□ -0.93
VPS4B-207ENST00000591519 A0A1W2PNR3 127 aa9.24□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF814B7Z6K7 855 aa9.24□□□□□ -0.93
VPS4B-207ENST00000591519 KLF11O14901 512 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms