RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RPS19P39019 145 aaKnown RBP13.52□□□□□ -0.24
RETREG3-208ENST00000589797 ETV5P41161 510 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 ETV1P50549 477 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 SGCBQ16585 318 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 XAF1Q6GPH4 301 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 CNIH2Q6PI25 160 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 VN1R4Q7Z5H5 301 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 PJA1Q8NG27 643 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 OR52I1Q8NGK6 324 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 OR5W2Q8NH69 310 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 SEMA6CQ9H3T2 930 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 PCDHGB1Q9Y5G3 927 aa13.52□□□□□ -0.24
RETREG3-208ENST00000589797 SEC14L5O43304 696 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 GABARAPO95166 117 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 CD1CP29017 333 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 FOXL2P58012 376 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 SNTA1Q13424 505 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 TBRG1Q3YBR2 411 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 PPP1R14AQ96A00 147 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 CLEC4MQ9H2X3 399 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 EXO1Q9UQ84 846 aaKnown RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 A0A0A6YYD5 115 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 A0A1W2PPL8 197 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 MAKP20794 623 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 ARFIP1P53367 373 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 EMP2P54851 167 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 ULK3Q6PHR2 472 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 USP51Q70EK9 711 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 ATCAYQ86WG3 371 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 FAM174AQ8TBP5 190 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 TNFAIP8L1Q8WVP5 186 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 CNN2Q99439 309 aaKnown RBP13.52□□□□□ -0.25
RETREG3-208ENST00000589797 ICE1Q9Y2F5 2266 aa13.52□□□□□ -0.25
RETREG3-208ENST00000589797 UBL4AP11441 157 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 CCNOP22674 350 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SLC1A3P43003 542 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 MAGEA2P43356 314 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 RAB38P57729 211 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ARHGAP11AQ6P4F7 1023 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ZCCHC12Q6PEW1 402 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 TIGD4Q8IY51 512 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 TSSK2Q96PF2 358 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 HINT3Q9NQE9 182 aaKnown RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SIT1Q9Y3P8 196 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 A0A0G2JMZ2 1700 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 CHD5Q8TDI0 1954 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 TNFRSF10CO14798 259 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ITGA10O75578 1167 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 CLUP10909 449 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF41P51814 821 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 PPP3R1P63098 170 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SERTAD2Q14140 314 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 PRAMEF20Q5VT98 475 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 FAHD1Q6P587 224 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 UBE3DQ7Z6J8 389 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SLC37A3Q8NCC5 494 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 NEK6Q9HC98 313 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SERINC1Q9NRX5 453 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 FAIMQ9NVQ4 179 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 CNOT2Q9NZN8 540 aaKnown RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 TEX13CA0A0J9YWL9 993 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 A0A1W2PPC4 97 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 A0A1W2PQ09 198 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SERPINA3P01011 423 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ACP2P11117 423 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 APEX1P27695 318 aaKnown RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SHC1P29353 583 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 OTX2P32243 289 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 KIAA1024LP59773 190 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 DUSP2Q05923 314 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 RAB40BQ12829 278 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 HTR4Q13639 388 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 PRSS53Q2L4Q9 553 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ACSM3Q53FZ2 586 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SLX4IPQ5VYV7 408 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 PAQR7Q86WK9 346 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-208ENST00000589797 NR4A3Q92570 626 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
RETREG3-208ENST00000589797 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 GALR3O60755 368 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 PPM1BO75688 479 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 NR4A2P43354 598 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 RELAQ04206 551 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 SGCAQ16586 387 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 C6orf183Q5T699 404 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 OR4D11Q8NGI4 311 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms