RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 MRGPRX4Q96LA9 322 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 PRRC1Q96M27 445 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF300Q96RE9 604 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 DEFB127Q9H1M4 99 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 ACKR4Q9NPB9 350 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 NDUFAF4Q9P032 175 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CACNA1GO43497 2377 aa13.76□□□□□ -0.21
ATG4D-211ENST00000589753 CNTRLQ7Z7A1 2325 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 A0A0B4J2E0 115 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 A0A1B0GWA3 101 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 A0A1B0GX12 115 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 C7orf72A4D263 438 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SHISA8B8ZZ34 492 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 J3KTA2 159 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SEMA7AO75326 666 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 NTN1O95631 604 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 MT-ND1P03886 318 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF17P17021 662 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 ADH6P28332 368 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SLC7A1P30825 629 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 IFNA8P32881 189 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 MAGEA2P43356 314 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 HTR3AP46098 478 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 DLX5P56178 289 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 TAS2R41P59536 307 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 NFATC3Q12968 1075 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 PIN1Q13526 163 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 CMPK2Q5EBM0 449 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SLC25A53Q5H9E4 307 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF613Q6PF04 617 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 ULK3Q6PHR2 472 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 PIWIL3Q7Z3Z3 882 aaKnown RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 GRINAQ7Z429 371 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 TSPYL5Q86VY4 417 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SIAH3Q8IW03 269 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 C10orf67Q8IYJ2 551 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 OR5M1Q8NGP8 315 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 DNAJA4Q8WW22 397 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SLCO4A1Q96BD0 722 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 DUS3LQ96G46 650 aaKnown RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 NPAS1Q99742 590 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 PIGQQ9BRB3 760 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 ADAM19Q9H013 955 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 TSPAN10Q9H1Z9 355 aaPredicted RBP13.75□□□□□ -0.21
ATG4D-211ENST00000589753 YY1AP1Q9H869 796 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 SELENONQ9NZV5 590 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
ATG4D-211ENST00000589753 NCKAP5O14513 1909 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 TRAPPC13A5PLN9 417 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 TTLL8A6PVC2 850 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 NPIPA5E9PKD4 350 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 FKBP6O75344 327 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 OR5F1O95221 314 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 RHCEP18577 417 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 TACR3P29371 465 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
ATG4D-211ENST00000589753 POLR2HP52434 150 aaKnown RBP13.74□□□□□ -0.21
ATG4D-211ENST00000589753 FOXK1P85037 733 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 MERTKQ12866 999 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 TMEM44Q2T9K0 475 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 IQCCQ4KMZ1 466 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 ALG10BQ5I7T1 473 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 PAPD5Q8NDF8 572 aaKnown RBP13.74□□□□□ -0.21
ATG4D-211ENST00000589753 RNF217Q8TC41 542 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 NR4A3Q92570 626 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 C3orf49Q96BT1 292 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 SNRNP40Q96DI7 357 aaKnown RBP13.74□□□□□ -0.21
ATG4D-211ENST00000589753 SLC41A3Q96GZ6 507 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 SFXN2Q96NB2 322 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 FNDC11Q9BVV2 318 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 SLC6A15Q9H2J7 730 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 LDAHQ9H6V9 325 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 NPIPA1Q9UND3 350 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 LIPGQ9Y5X9 500 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 HEATR5AQ86XA9 2040 aa13.74□□□□□ -0.21
ATG4D-211ENST00000589753 PCNX3Q9H6A9 2034 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 TRGV5A0A0B4J1U4 118 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 OR2M5A3KFT3 312 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 FFAR1O14842 300 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ENTPD5O75356 428 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 DIRAS1O95057 198 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 WISP1O95388 367 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 IGHG3P01860 377 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ELK4P28324 431 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 GCKP35557 465 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 CDH12P55289 794 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 B3GALT5-AS1P59052 145 aa13.73□□□□□ -0.21
ATG4D-211ENST00000589753 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
ATG4D-211ENST00000589753 ZNF324BQ6AW86 544 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-211ENST00000589753 AAGABQ6PD74 315 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms