RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 C5orf46Q6UWT4 87 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ESPNLQ6ZVH7 1005 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 CBLL1Q75N03 491 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 HMGN2P46Q86SG4 172 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 LILRA2Q8N149 483 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 MCUR1Q96AQ8 359 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TAMM41Q96BW9 452 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 SLC7A6OSQ96CW6 309 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ASB9Q96DX5 294 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ARHGDIGQ99819 225 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 UGT2B28Q9BY64 529 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TRIM15Q9C019 465 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 PRDM14Q9GZV8 571 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ADAM19Q9H013 955 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 PCDHAC1Q9H158 963 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TP63Q9H3D4 680 aaPredicted RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 TIGARQ9NQ88 270 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 DCAF13Q9NV06 445 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ACTR3BQ9P1U1 418 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 RPS6KB2Q9UBS0 482 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 EGFL7Q9UHF1 273 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 RALYQ9UKM9 306 aaKnown RBP8.2□□□□□ -1.1
CIRBP-218ENST00000588344 SLC6A5Q9Y345 797 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF337Q9Y3M9 751 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 CHST2Q9Y4C5 530 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 CNTRLQ7Z7A1 2325 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 FAM208BQ5VWN6 2430 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 ZFYVE26Q68DK2 2539 aa8.2□□□□□ -1.1
CIRBP-218ENST00000588344 C17orf51A8MQB3 221 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 J3QKU1 62 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ADAMDEC1O15204 470 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 GSC2O15499 205 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF208O43345 1280 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF682O95780 498 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 SERPINA1P01009 418 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 TPOP07202 933 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 GKN3PP0CG01 181 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 THRBP10828 461 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF708P17019 499 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CD247P20963 164 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CXCR1P25024 350 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CA7P43166 264 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 LHX2P50458 406 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 PLAURQ03405 335 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 GABPB1Q06547 395 aaPredicted RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 MERTKQ12866 999 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 FOXF1Q12946 379 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CEACAM7Q14002 265 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 TOMM34Q15785 309 aaPredicted RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 IGFBP7Q16270 282 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 EEF1A1P5Q5VTE0 462 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ZNF613Q6PF04 617 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 PLEKHM3Q6ZWE6 761 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 YTHDF3Q7Z739 585 aaKnown RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 DHFR2Q86XF0 187 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 DOLPP1Q86YN1 238 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CHERPQ8IWX8 916 aaKnown RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CADM2Q8N3J6 435 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 RNF148Q8N7C7 305 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 GPR32P1Q8NGA4 272 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 POC1BQ8TC44 478 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 RELTQ969Z4 430 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 SLC47A1Q96FL8 570 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 WDYHV1Q96HA8 205 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 TPD52L3Q96J77 140 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 LRGUKQ96M69 825 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 NSMCE2Q96MF7 247 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 UCN2Q96RP3 112 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 MCHR1Q99705 422 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 CALHM2Q9HA72 323 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 SPRR3Q9UBC9 169 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 USP22Q9UPT9 525 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 SH3GLB1Q9Y371 365 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 HDGFL3Q9Y3E1 203 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 HRH3Q9Y5N1 445 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 LIPGQ9Y5X9 500 aa8.19□□□□□ -1.1
CIRBP-218ENST00000588344 TNRC6AQ8NDV7 1962 aaKnown RBP8.19□□□□□ -1.1
CIRBP-218ENST00000588344 NUP214P35658 2090 aaPredicted RBP8.18□□□□□ -1.1
CIRBP-218ENST00000588344 ATRXP46100 2492 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 TMED7-TICAM2A0A0A6YYA0 188 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 TRGV8A0A0C4DH27 118 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 HTR3EA5X5Y0 456 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 CD8B2A6NJW9 211 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 E9PLN8 166 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 H0Y3Z8 333 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 H3BML4 177 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 ARPC2O15144 300 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 ADAM11O75078 769 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 BCAS1O75363 584 aaPredicted RBP8.18□□□□□ -1.1
CIRBP-218ENST00000588344 WISP2O76076 250 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 OPN1SWP03999 348 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 IFNW1P05000 195 aa8.18□□□□□ -1.1
CIRBP-218ENST00000588344 NCK1P16333 377 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms