RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RNF217Q8TC41 542 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 GPR119Q8TDV5 335 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 C3orf49Q96BT1 292 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 AGAP4Q96P64 663 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 FEVQ99581 238 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 RBM4BQ9BQ04 359 aaKnown RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 PSD2Q9BQI7 771 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 UTP23Q9BRU9 249 aaKnown RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 RBM4Q9BWF3 364 aaKnown RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 HES7Q9BYE0 225 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 SDHAF3Q9NRP4 125 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CNIH4Q9P003 139 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 RPS6KB2Q9UBS0 482 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 TMEFF2Q9UIK5 374 aaPredicted RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 FBXL2Q9UKC9 423 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 HEATR5AQ86XA9 2040 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 MED13Q9UHV7 2174 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 PINLYPA6NC86 204 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ANKRD33BA6NCL7 494 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 OR5H15A6NDH6 313 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ARRDC5A6NEK1 342 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 OR10H3O60404 316 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 MITFO75030 526 aaPredicted RBP10.28□□□□□ -0.76
VMP1-207ENST00000588131 GASTP01350 101 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 P04436 131 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 UQCRBP14927 111 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 PGCP20142 388 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 CBLP22681 906 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 MSX1P28360 303 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 SUMO3P55854 103 aaPredicted RBP10.28□□□□□ -0.76
VMP1-207ENST00000588131 TLE3Q04726 772 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 OR1C1Q15619 314 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 KDM4DQ6B0I6 523 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 PGBD2Q6P3X8 592 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ULK3Q6PHR2 472 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ARSKQ6UWY0 536 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 GALNT5Q7Z7M9 940 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ATG4DQ86TL0 474 aaPredicted RBP10.28□□□□□ -0.76
VMP1-207ENST00000588131 ATG16L2Q8NAA4 619 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 AQP11Q8NBQ7 271 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 PFN4Q8NHR9 129 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ACOT11Q8WXI4 607 aaPredicted RBP10.28□□□□□ -0.76
VMP1-207ENST00000588131 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 TMEM41AQ96HV5 264 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ZNF597Q96LX8 424 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
VMP1-207ENST00000588131 NPAS1Q99742 590 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 NIPSNAP1Q9BPW8 284 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 ADAM19Q9H013 955 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 VCXQ9H320 206 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 TIMMDC1Q9NPL8 285 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 C8orf4Q9NR00 106 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 DEPPQ9NTK1 212 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 TAS2R10Q9NYW0 307 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 KIF17Q9P2E2 1029 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 RAXQ9Y2V3 346 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 AKAP13Q12802 2813 aa10.28□□□□□ -0.76
VMP1-207ENST00000588131 A0A087WUJ7 227 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 SHISA8B8ZZ34 492 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 KPNA4O00629 521 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 SLC25A12O75746 678 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 CEACAM4O75871 244 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 SNX4O95219 450 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 SNAP29O95721 258 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 C1QTNF9P0C862 333 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 GP1BBP13224 206 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 POU2F1P14859 743 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 PRKCAP17252 672 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 IGFBP5P24593 272 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 TACR3P29371 465 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 SLC1A3P43003 542 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 OMPP47874 163 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 MASP1P48740 699 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 GPR85P60893 370 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 IL1RL1Q01638 556 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 ZIK1Q3SY52 487 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 LINC00114Q6XXX2 140 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 MBOAT2Q6ZWT7 520 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 ZER1Q7Z7L7 766 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 PLCZ1Q86YW0 608 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 P3H2Q8IVL5 708 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 NRMQ8IXM6 262 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 MDS2Q8NDY4 140 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 OR4K17Q8NGC6 315 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 DNAJA4Q8WW22 397 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 TMEM239Q8WW34 195 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 DNAJC9Q8WXX5 260 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 GTPBP3Q969Y2 492 aaKnown RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 JSRP1Q96MG2 331 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 MBOAT4Q96T53 435 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 GPA33Q99795 319 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 ZNF426Q9BUY5 554 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 RNF32Q9H0A6 362 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 MED17Q9NVC6 651 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms