RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 LIM2P55344 173 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 KRTAP10-9P60411 292 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 GBE1Q04446 702 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 MRPL28Q13084 256 aaKnown RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 KCNJ11Q14654 390 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 SLC10A1Q14973 349 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 IMMTQ16891 758 aaKnown RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 FAAP20Q6NZ36 180 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 METAP1DQ6UB28 335 aaPredicted RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 TPRA1Q86W33 373 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 BBS5Q8N3I7 341 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 SLC2A14Q8TDB8 520 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 TFB1MQ8WVM0 346 aaKnown RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 ITLN1Q8WWA0 313 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 C10orf35Q96D05 121 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 RASD2Q96D21 266 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 COPS8Q99627 209 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 TSSK1BQ9BXA7 367 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 RHBGQ9H310 441 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 PNO1Q9NRX1 252 aaKnown RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 ARMCX1Q9P291 453 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 ZNF639Q9UID6 485 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 SAMD4AQ9UPU9 718 aaKnown RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 ADAMTS12P58397 1594 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 PCNTO95613 3336 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 TCOF1Q13428 1488 aaKnown RBP4.31□□□□□ -1.72
TUBD1-208ENST00000588009 ZNF840PA6NDX5 716 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CCT8L1PA6NM43 557 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 PP2D1A8MPX8 630 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 SHISA9B4DS77 424 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 E9PLD3 99 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 SAP18O00422 153 aaKnown RBP4.31□□□□□ -1.72
TUBD1-208ENST00000588009 SLC17A2O00624 439 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 UGT2B17O75795 530 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CD55P08174 381 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CCNCP24863 283 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CD80P33681 288 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 UGT1A5P35504 534 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CUL1Q13616 776 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 HSP90AB3PQ58FF7 597 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 OR2A2Q6IF42 318 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 DHDDSQ86SQ9 333 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CDR2LQ86X02 465 aaPredicted RBP4.31□□□□□ -1.72
TUBD1-208ENST00000588009 TRPV1Q8NER1 839 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 OR4D9Q8NGE8 314 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 OR6T1Q8NGN1 323 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 MAIP1Q8WWC4 291 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
TUBD1-208ENST00000588009 MTMR9Q96QG7 549 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 CHRDL1Q9BU40 450 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 VCPKMTQ9H867 229 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 PAK1IP1Q9NWT1 392 aaPredicted RBP4.31□□□□□ -1.72
TUBD1-208ENST00000588009 SENP1Q9P0U3 644 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 IFT52Q9Y366 437 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 TMED5Q9Y3A6 229 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 STYXL1Q9Y6J8 313 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 KDM5BQ9UGL1 1544 aa4.31□□□□□ -1.72
TUBD1-208ENST00000588009 C3P01024 1663 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 A0A1W2PPR1 153 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 BTBD17A6NE02 478 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 FAM220BPB1ANY3 271 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 E9PAM4 449 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 F5H6K3 240 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 VENTXO95231 258 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 SLC2A10O95528 541 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 NDUFB10O96000 172 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 IGHG4P01861 327 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 LAMP1P11279 417 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 CCDC130P13994 396 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 POLR2EP19388 210 aaKnown RBP4.3□□□□□ -1.72
TUBD1-208ENST00000588009 PTBP1P26599 531 aaKnown RBP eCLIP4.3□□□□□ -1.72
TUBD1-208ENST00000588009 RPL13AP40429 203 aaKnown RBP4.3□□□□□ -1.72
TUBD1-208ENST00000588009 ATP5OP48047 213 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 ATP1B3P54709 279 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 HMGCS2P54868 508 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 KLRC3Q07444 240 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 KLHL22Q53GT1 634 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 C6orf226Q5I0X4 101 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 CTSL3PQ5NE16 218 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 ZNF343Q6P1L6 599 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 SLC35F2Q8IXU6 374 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 ARNTL2Q8WYA1 636 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 ZBED6CLQ96FA7 236 aaPredicted RBP4.3□□□□□ -1.72
TUBD1-208ENST00000588009 PPP1R16AQ96I34 528 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 CELF6Q96J87 481 aaKnown RBP4.3□□□□□ -1.72
TUBD1-208ENST00000588009 GNB4Q9HAV0 340 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 SPATA7Q9P0W8 599 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 DHRS4-AS1Q9P1J3 65 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 MOB4Q9Y3A3 225 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 NPTNQ9Y639 398 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 VWDEQ8N2E2 1590 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 PLA2R1Q13018 1463 aa4.3□□□□□ -1.72
TUBD1-208ENST00000588009 SUPT6HQ7KZ85 1726 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ROBO1Q9Y6N7 1651 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ZCCHC11Q5TAX3 1644 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 EFCAB7A8K855 629 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 POLR2DO15514 142 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms