RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.74□□□□□ -0.37
VMP1-206ENST00000587945 C16orf62Q7Z3J2 963 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
VMP1-206ENST00000587945 MREGQ8N565 214 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 XAGE5Q8WWM1 108 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
VMP1-206ENST00000587945 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 TMEM204Q9BSN7 226 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 GSX2Q9BZM3 304 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 CENPHQ9H3R5 247 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 PNPOQ9NVS9 261 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 PRSS50Q9UI38 385 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 PCDHGB4Q9UN71 923 aa12.74□□□□□ -0.37
VMP1-206ENST00000587945 ROS1P08922 2347 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 PRSS51A0A1B0GVH4 220 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 HS3ST1O14792 307 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 SMAD9O15198 467 aaKnown RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 DNAJA2O60884 412 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 AK1P00568 194 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 HEXAP06865 529 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 DHRS4L1P0CG22 281 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 UQCRC2P22695 453 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 NME5P56597 212 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 FUT5Q11128 374 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 MERTKQ12866 999 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 TAB1Q15750 504 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 TYW3Q6IPR3 259 aaKnown RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 EIF3MQ7L2H7 374 aaKnown RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 SLC43A2Q8N370 569 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 LILRB1Q8NHL6 650 aaPredicted RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 TMEM171Q8WVE6 324 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 ZNF300Q96RE9 604 aaPredicted RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 PSD2Q9BQI7 771 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 TACO1Q9BSH4 297 aaKnown RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 HDHD5Q9BXW7 423 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 GP6Q9HCN6 339 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 KCNK9Q9NPC2 374 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 EXD2Q9NVH0 621 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 KLHL9Q9P2J3 617 aa12.73□□□□□ -0.37
VMP1-206ENST00000587945 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.73□□□□□ -0.37
VMP1-206ENST00000587945 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 CLOCKO15516 846 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 KIAA0513O60268 411 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 RYKP34925 604 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 RASGEF1BQ0VAM2 473 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 STX3Q13277 289 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 ATAD3BQ5T9A4 648 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 ANXA8L1Q5VT79 327 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 SAXO2Q658L1 398 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 BHLHA15Q7RTS1 189 aaPredicted RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 ST8SIA1Q92185 356 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 ZNF75CPQ92670 426 aaPredicted RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 KISS1RQ969F8 398 aaPredicted RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 ROPN1LQ96C74 230 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 TEX37Q96LM6 180 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 PAIP2Q9BPZ3 127 aaKnown RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 BDH2Q9BUT1 245 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
VMP1-206ENST00000587945 ACER3Q9NUN7 267 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 WDR45Q9Y484 360 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 ARID1AO14497 2285 aa12.72□□□□□ -0.37
VMP1-206ENST00000587945 TM9SF1O15321 606 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 CYTIPO60759 359 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 LYZL6O75951 148 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.37
VMP1-206ENST00000587945 FESP07332 822 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 LBPP18428 481 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 PGCP20142 388 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 CHI3L1P36222 383 aaPredicted RBP12.71□□□□□ -0.37
VMP1-206ENST00000587945 PGM1P36871 562 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 OR3A2P47893 321 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 DIO1P49895 249 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 ATP5J2P56134 94 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 UFM1P61960 85 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 PLAURQ03405 335 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 CHRNEQ04844 493 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 ITGADQ13349 1161 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 CASP8Q14790 479 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 P2RY6Q15077 328 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 FAM174BQ3ZCQ3 159 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 NCMAPQ5T1S8 102 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 TMPPEQ6ZT21 453 aa12.71□□□□□ -0.37
VMP1-206ENST00000587945 HSD17B8Q92506 261 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms