RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 PLGP00747 810 aaPredicted RBP14.36□□□□□ -0.11
CXXC1-209ENST00000587342 IDO1P14902 403 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 ENPP1P22413 925 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 KCNJ5P48544 419 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 SESN3P58005 492 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 SELENBP1Q13228 472 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 TIGD2Q4W5G0 525 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 ATAD3BQ5T9A4 648 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 ANKRD34AQ69YU3 496 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 STAC2Q6ZMT1 411 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 EIF3MQ7L2H7 374 aaKnown RBP14.36□□□□□ -0.11
CXXC1-209ENST00000587342 NUFIP2Q7Z417 695 aaKnown RBP14.36□□□□□ -0.11
CXXC1-209ENST00000587342 CNOT9Q92600 299 aaKnown RBP14.36□□□□□ -0.11
CXXC1-209ENST00000587342 HS3ST6Q96QI5 342 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 C12orf49Q9H741 205 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 SLCO1B3Q9NPD5 702 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 USH1CQ9Y6N9 552 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 SETD2Q9BYW2 2564 aaPredicted RBP14.36□□□□□ -0.11
CXXC1-209ENST00000587342 NF1P21359 2839 aa14.36□□□□□ -0.11
CXXC1-209ENST00000587342 PRR14LQ5THK1 2151 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 C16orf97H3BN30 126 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 AP3D1O14617 1153 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 DIAPH2O60879 1101 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 SLC22A3O75751 556 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 GOSR1O95249 250 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 RPS4Y1P22090 263 aaKnown RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 CRYGSP22914 178 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 EDNRAP25101 427 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 CTBP2P56545 445 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 GPAT3Q53EU6 434 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 FBXW10Q5XX13 1052 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 EPGNQ6UW88 154 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ZNF621Q6ZSS3 439 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 PLEKHM3Q6ZWE6 761 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 FCRLAQ7L513 359 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 GLB1L3Q8NCI6 653 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ST8SIA1Q92185 356 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 CPNE4Q96A23 557 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 VPS33AQ96AX1 596 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 AURKBQ96GD4 344 aaPredicted RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ZC3HAV1LQ96H79 300 aaKnown RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ATP6V1G3Q96LB4 118 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ZBTB18Q99592 522 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 SLC39A3Q9BRY0 314 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 MED18Q9BUE0 208 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ACER3Q9NUN7 267 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 ZIM2Q9NZV7 527 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 KLHL13Q9P2N7 655 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 NDRG3Q9UGV2 375 aa14.35□□□□□ -0.11
CXXC1-209ENST00000587342 AGAP5A6NIR3 686 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 SMAD9O15198 467 aaKnown RBP14.34□□□□□ -0.11
CXXC1-209ENST00000587342 RAF1P04049 648 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 CD1EP15812 388 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 HOXB9P17482 250 aaPredicted RBP14.34□□□□□ -0.11
CXXC1-209ENST00000587342 MERTKQ12866 999 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 C3orf33Q6P1S2 294 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 TFAP2EQ6VUC0 442 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 TUSC5Q8IXB3 177 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 OIT3Q8WWZ8 545 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 MBD6Q96DN6 1003 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 C7orf26Q96N11 449 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 EBF4Q9BQW3 602 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 CCDC106Q9BWC9 280 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 GLRX2Q9NS18 164 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 SLC35A3Q9Y2D2 325 aa14.34□□□□□ -0.11
CXXC1-209ENST00000587342 GJE1A6NN92 205 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 RFXANKO14593 260 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 UBDO15205 165 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 GCM2O75603 506 aaPredicted RBP14.33□□□□□ -0.12
CXXC1-209ENST00000587342 IL6P05231 212 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 ETFAP13804 333 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 CD53P19397 219 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 DNASE1P24855 282 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 RYKP34925 604 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 KCNJ10P78508 379 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 GSTA3Q16772 222 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 KRTAP1-3Q8IUG1 177 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 TRIML2Q8N7C3 387 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 DNAJA3Q96EY1 480 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 PIK3IP1Q96FE7 263 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 OR5B2Q96R09 309 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 EXOSC3Q9NQT5 275 aaKnown RBP14.33□□□□□ -0.12
CXXC1-209ENST00000587342 CTPS2Q9NRF8 586 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 DSPPQ9NZW4 1301 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 FREM1Q5H8C1 2179 aa14.33□□□□□ -0.12
CXXC1-209ENST00000587342 RAI1Q7Z5J4 1906 aaPredicted RBP14.33□□□□□ -0.12
CXXC1-209ENST00000587342 VPS13CQ709C8 3753 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 CASKO14936 926 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 PGCP20142 388 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 SLC7A1P30825 629 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 IDH3AP50213 366 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 POLR2JP52435 117 aaKnown RBP14.32□□□□□ -0.12
CXXC1-209ENST00000587342 RAC3P60763 192 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 HPCAP84074 193 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 LRRC74AQ0VAA2 488 aa14.32□□□□□ -0.12
CXXC1-209ENST00000587342 RNPS1Q15287 305 aaKnown RBP14.32□□□□□ -0.12
CXXC1-209ENST00000587342 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms