RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FADS1O60427 444 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF354AO60765 605 aaPredicted RBP18.16■□□□□ 0.5
TRIM47-204ENST00000587339 SLC6A8P48029 635 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 EMX1Q04741 257 aaPredicted RBP18.16■□□□□ 0.5
TRIM47-204ENST00000587339 EIF3IQ13347 325 aaKnown RBP18.16■□□□□ 0.5
TRIM47-204ENST00000587339 SNAPC1Q16533 368 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 SLC30A6Q6NXT4 461 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 OR5M3Q8NGP4 307 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 MYDGFQ969H8 173 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 SLC38A2Q96QD8 506 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 TEX12Q9BXU0 123 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 DEFB126Q9BYW3 111 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 HS3ST3B1Q9Y662 390 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 CEPT1Q9Y6K0 416 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-204ENST00000587339 EIF4E2O60573 245 aaKnown RBP18.15■□□□□ 0.5
TRIM47-204ENST00000587339 FUT1P19526 365 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 PCMT1P22061 227 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 CRYZQ08257 329 aaKnown RBP18.15■□□□□ 0.5
TRIM47-204ENST00000587339 TMEM164Q5U3C3 297 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 MRGPREQ86SM8 312 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 OR2T33Q8NG76 320 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF563Q8TA94 476 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ELP5Q8TE02 316 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 GGHQ92820 318 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF700Q9H0M5 742 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 OR52D1Q9H346 318 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 GPR83Q9NYM4 423 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 IL20RAQ9UHF4 553 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 EFCAB9A8MZ26 197 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 SCO2O43819 266 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ENTPD6O75354 484 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 MT-ND2P03891 347 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 PNMTP11086 282 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 NAGAP17050 411 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 BMP7P18075 431 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 TCN2P20062 427 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ITPKBP27987 946 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 FBXW4P57775 412 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 TMEM201Q5SNT2 666 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 HES3Q5TGS1 186 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 TIPARPQ7Z3E1 657 aaKnown RBP18.15■□□□□ 0.5
TRIM47-204ENST00000587339 SVOPQ8N4V2 548 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 FAM26EQ8N5C1 309 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 PRSS33Q8NF86 280 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 FANK1Q8TC84 345 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 TMCO6Q96DC7 493 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 SAMD8Q96LT4 415 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 SIGLEC11Q96RL6 698 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 CCNL2Q96S94 520 aaPredicted RBP18.15■□□□□ 0.5
TRIM47-204ENST00000587339 FKBP14Q9NWM8 211 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 DNAJC27Q9NZQ0 273 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 PCDHGA3Q9Y5H0 932 aa18.15■□□□□ 0.5
TRIM47-204ENST00000587339 ENO4A6NNW6 628 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 C9orf172C9J069 976 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 GMFGO60234 142 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 NADKO95544 446 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-204ENST00000587339 DLGAP3O95886 979 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 COX6A1P12074 109 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 TMED10P49755 219 aaKnown RBP18.14■□□□□ 0.49
TRIM47-204ENST00000587339 EFNB1P98172 346 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 EXT1Q16394 746 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 OCLNQ16625 522 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 CNPY1Q3B7I2 92 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 RPL13AP3Q6NVV1 102 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 PIP4P1Q86T03 277 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 OR52L1Q8NGH7 329 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 BRIX1Q8TDN6 353 aaKnown RBP18.14■□□□□ 0.49
TRIM47-204ENST00000587339 MYCBPQ99417 103 aaPredicted RBP18.14■□□□□ 0.49
TRIM47-204ENST00000587339 ICAM5Q9UMF0 924 aa18.14■□□□□ 0.49
TRIM47-204ENST00000587339 A0A1W2PNU3 283 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 ELOA3DA6NLF2 546 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OR2J2O76002 312 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 RCBTB2O95199 551 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 NUDT14O95848 222 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 TGM1P22735 817 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SLC1A3P43003 542 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 ELOA3BQ3SY89 546 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SLC25A30Q5SVS4 291 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 CCDC81Q6ZN84 652 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OAFQ86UD1 273 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 ELOA3Q8NG57 546 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OR13C2Q8NGS9 318 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OR4Q3Q8NH05 313 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 LRR1Q96L50 414 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 IMMP1LQ96LU5 166 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 LHPPQ9H008 270 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SIGLEC7Q9Y286 467 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 HEATR5AQ86XA9 2040 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 EFCAB10A6NFE3 127 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 C17orf51A8MQB3 221 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 FADS2O95864 444 aaKnown RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 CH25HO95992 272 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 IGHEP01854 428 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 CDK1P06493 297 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 MST1P26927 711 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 C21orf33P30042 268 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 FXYD6P3P58550 94 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 ST3GAL4Q11206 333 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 PGGHGQ32M88 737 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms