RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 FUT4P22083 530 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 NME2P22392 152 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 MSX1P28360 303 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 P2RX1P51575 399 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 SUMO3P55854 103 aaPredicted RBP13.59□□□□□ -0.23
NFIX-208ENST00000587260 TRAM2Q15035 370 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 LRRC36Q1X8D7 754 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 MICAQ29983 383 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 SLC25A25Q6KCM7 469 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 PLEKHM3Q6ZWE6 761 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 C9orf43Q8TAL5 461 aaPredicted RBP13.59□□□□□ -0.23
NFIX-208ENST00000587260 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 SLC29A1Q99808 456 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 RHCGQ9UBD6 479 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
NFIX-208ENST00000587260 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 A0A1B0GX12 115 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SOCS2O14508 198 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 LYPD3O95274 346 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 LINGO3P0C6S8 592 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 UQCRBP14927 111 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
NFIX-208ENST00000587260 RFC3P40938 356 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 PPP1R8Q12972 351 aaKnown RBP13.58□□□□□ -0.24
NFIX-208ENST00000587260 EXOC3L2Q2M3D2 409 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SWT1Q5T5J6 900 aaKnown RBP13.58□□□□□ -0.24
NFIX-208ENST00000587260 TBPL2Q6SJ96 375 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 IGFL3Q6UXB1 125 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 ASB18Q6ZVZ8 466 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 GDF7Q7Z4P5 450 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SULF2Q8IWU5 870 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 CBR4Q8N4T8 237 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 LINC00471Q8N535 108 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 OR52J3Q8NH60 311 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 B4GALNT2Q8NHY0 566 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SLC7A13Q8TCU3 470 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SDCCAG3Q96C92 435 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 SLC41A3Q96GZ6 507 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 ZNF597Q96LX8 424 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 KLHDC3Q9BQ90 382 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 TUBA8Q9NY65 449 aaPredicted RBP13.58□□□□□ -0.24
NFIX-208ENST00000587260 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 MED11Q9P086 117 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 KLF13Q9Y2Y9 288 aaPredicted RBP13.58□□□□□ -0.24
NFIX-208ENST00000587260 HEATR5AQ86XA9 2040 aa13.58□□□□□ -0.24
NFIX-208ENST00000587260 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 ITPR1Q14643 2758 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 TRAV17A0A0B4J275 112 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 TRBV4-1A0A0J9YWV2 114 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 A0A1B0GWA3 101 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PDLIM1O00151 329 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 SNPHO15079 494 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 SNX4O95219 450 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 NUDT14O95848 222 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 HPRP00739 348 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 CNR1P21554 472 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 RYKP34925 604 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 MEOX1P50221 254 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 DLX5P56178 289 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 COPZ1P61923 177 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PPP2R2BQ00005 443 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 CBFBQ13951 182 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 DCST1Q5T197 706 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 WBP2NLQ6ICG8 309 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 ZNF770Q6IQ21 691 aaPredicted RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 ULK3Q6PHR2 472 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 WDSUB1Q8N9V3 476 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 OR2M7Q8NG81 312 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 GIPC3Q8TF64 312 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 DNAJA4Q8WW22 397 aaPredicted RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 MPP4Q96JB8 637 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 BARD1Q99728 777 aaKnown RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 FAM173AQ9BQD7 235 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 VCXQ9H320 206 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 CTPS2Q9NRF8 586 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PDP1Q9P0J1 537 aaPredicted RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 LUZP4Q9P127 313 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 FBXL2Q9UKC9 423 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PCDHGB7Q9Y5F8 929 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
NFIX-208ENST00000587260 CNTRLQ7Z7A1 2325 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 PCNX3Q9H6A9 2034 aa13.57□□□□□ -0.24
NFIX-208ENST00000587260 SH3PXD2BA1X283 911 aa13.56□□□□□ -0.24
NFIX-208ENST00000587260 LRRC3CA6NJW4 275 aa13.56□□□□□ -0.24
NFIX-208ENST00000587260 CHP2O43745 196 aa13.56□□□□□ -0.24
NFIX-208ENST00000587260 CDC40O60508 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
NFIX-208ENST00000587260 TRIM3O75382 744 aaPredicted RBP13.56□□□□□ -0.24
NFIX-208ENST00000587260 ALPLP05186 524 aa13.56□□□□□ -0.24
NFIX-208ENST00000587260 PGCP20142 388 aa13.56□□□□□ -0.24
NFIX-208ENST00000587260 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms