RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 NRMQ8IXM6 262 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 C10orf53Q8N6V4 93 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 POGLUT1Q8NBL1 392 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 FAM71CQ8NEG0 241 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 OR4K17Q8NGC6 315 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 OR4D11Q8NGI4 311 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 OR4C3Q8NH37 302 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 OR5W2Q8NH69 310 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 TMEM255BQ8WV15 326 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 ST8SIA1Q92185 356 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 HIST1H2ACQ93077 130 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 ZG16BQ96DA0 208 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 FAM46AQ96IP4 442 aaKnown RBP5.67□□□□□ -1.5
LIG3-206ENST00000586058 THOC3Q96J01 351 aaKnown RBP5.67□□□□□ -1.5
LIG3-206ENST00000586058 Q96MT0 163 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 LMF1Q96S06 567 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 RASL10BQ96S79 203 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 MBOAT4Q96T53 435 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 NIPSNAP1Q9BPW8 284 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 WDR77Q9BQA1 342 aaPredicted RBP5.67□□□□□ -1.5
LIG3-206ENST00000586058 SLC19A3Q9BZV2 496 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 SERINC1Q9NRX5 453 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 CLN6Q9NWW5 311 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 TAS2R10Q9NYW0 307 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 B4GALT7Q9UBV7 327 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
LIG3-206ENST00000586058 DKKL1Q9UK85 242 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 BAIAP2Q9UQB8 552 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 PCDHGB6Q9Y5F9 930 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 MAGED1Q9Y5V3 778 aaPredicted RBP5.67□□□□□ -1.5
LIG3-206ENST00000586058 WIF1Q9Y5W5 379 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 DOCK10Q96BY6 2186 aa5.67□□□□□ -1.5
LIG3-206ENST00000586058 USP34Q70CQ2 3546 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 A0A087WUU8 490 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 IRGMA1A4Y4 181 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 ANKUB1A6NFN9 424 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 ENO4A6NNW6 628 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CDRT15L2A8MXV6 281 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 DLL1O00548 723 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 FFAR1O14842 300 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 GMFGO60234 142 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 MITFO75030 526 aaPredicted RBP5.66□□□□□ -1.5
LIG3-206ENST00000586058 OR6B1O95007 311 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SOX14O95416 240 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 AHSA1O95433 338 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 EPPINO95925 133 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CLPTM1O96005 669 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 GASTP01350 101 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 IFNGP01579 166 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 PRG2P13727 222 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 PAICSP22234 425 aaKnown RBP5.66□□□□□ -1.5
LIG3-206ENST00000586058 HTR2AP28223 471 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 NOS3P29474 1203 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SLC6A6P31641 620 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 GGT2P36268 569 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SOX3P41225 446 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SLC1A3P43003 542 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 GPR4P46093 362 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CYB561P49447 251 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 MAP2K6P52564 334 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 FBXW4P57775 412 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 FOXL2P58012 376 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 TEKQ02763 1124 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 PRKCDQ05655 676 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CRYZQ08257 329 aaKnown RBP5.66□□□□□ -1.5
LIG3-206ENST00000586058 RAPSNQ13702 412 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 ATP1A4Q13733 1029 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 MFSD13AQ14CX5 517 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CD226Q15762 336 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 COL28A1Q2UY09 1125 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 ANKDD1AQ495B1 522 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 IQCCQ4KMZ1 466 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 FNDC7Q5VTL7 733 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 BROXQ5VW32 411 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 MEDAGQ5VYS4 303 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SLC22A10Q63ZE4 541 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SLC27A4Q6P1M0 643 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 TMEM81Q6P7N7 255 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 IL20RBQ6UXL0 311 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CD300LDQ6UXZ3 194 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 RASSF6Q6ZTQ3 369 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 PTCHD4Q6ZW05 846 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 GRINAQ7Z429 371 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 NANOGNBQ7Z5D8 188 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 OAFQ86UD1 273 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 MARCH3Q86UD3 253 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 NKAIN4Q8IVV8 208 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SVOPQ8N4V2 548 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 CLDN22Q8N7P3 220 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 TSPAN14Q8NG11 270 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 OR2T33Q8NG76 320 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 THAP4Q8WY91 577 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 HDAC2Q92769 488 aaKnown RBP5.66□□□□□ -1.5
LIG3-206ENST00000586058 NKD1Q969G9 470 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 DDIT4LQ96D03 193 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 BPIFA2Q96DR5 249 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 SGTBQ96EQ0 304 aa5.66□□□□□ -1.5
LIG3-206ENST00000586058 HRASLS5Q96KN8 279 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms