RNA–Protein interactions for RNA: ENST00000586039.1

PKN1-205, Transcript of protein kinase N1, human

TSL 2

Gene PKN1, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-205	ENST00000586039	TACSTD2	P09758	323 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	SFTPD	P35247	375 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	ETV4	P43268	484 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	RFX3	P48380	749 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	ARFIP2	P53365	341 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	PRR5	P85299	388 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	ZSWIM7	Q19AV6	140 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	SWI5	Q1ZZU3	235 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	SPDYA	Q5MJ70	313 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	ANKS4B	Q8N8V4	417 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	OR2T11	Q8NH01	316 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	MRPL24	Q96A35	216 aa	Known RBP	13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	NPAS1	Q99742	590 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	SRXN1	Q9BYN0	137 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	KCNK9	Q9NPC2	374 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	KLHL9	Q9P2J3	617 aa		13.62	□□□□□ -0.23
PKN1-205	ENST00000586039	POLR3H	Q9Y535	204 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-205	ENST00000586039		A0A1W2PRB8	838 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	ITM2A	O43736	263 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	PCDH7	O60245	1069 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	PLOD3	O60568	738 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	COQ9	O75208	318 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	RAD51D	O75771	328 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	IL3	P08700	152 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	LINC00032	P0C843	101 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	MLC1	Q15049	377 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	PLPPR5	Q32ZL2	321 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	TNFAIP8L3	Q5GJ75	292 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	SLC46A3	Q7Z3Q1	461 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	GLCCI1	Q86VQ1	547 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	CDC26	Q8NHZ8	85 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	C16orf78	Q8WTQ4	265 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	SNX18	Q96RF0	628 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	BCO1	Q9HAY6	547 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039		Q9N2J8	555 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	MED17	Q9NVC6	651 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	CCL27	Q9Y4X3	112 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	SLC25A15	Q9Y619	301 aa		13.61	□□□□□ -0.23
PKN1-205	ENST00000586039	CIB4	A0PJX0	185 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	GJE1	A6NN92	205 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	AZIN1	O14977	448 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	LILRA1	O75019	489 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	UTS2	O95399	124 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	STAMBP	O95630	424 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	GIF	P27352	417 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	MANF	P55145	182 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	FOXL1	Q12952	345 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	IMPG1	Q17R60	797 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	MST1L	Q2TV78	715 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	APOOL	Q6UXV4	268 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	ZNF100	Q8IYN0	542 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	SVOPL	Q8N434	492 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	ANKRD42	Q8N9B4	389 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	TOR1AIP2	Q8NFQ8	470 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	OR7G2	Q8NG99	324 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	ACTRT2	Q8TDY3	377 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	SAP130	Q9H0E3	1048 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	GIMAP4	Q9NUV9	329 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	NTM	Q9P121	344 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	ZDHHC2	Q9UIJ5	367 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	MID2	Q9UJV3	735 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	USP22	Q9UPT9	525 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	STK38L	Q9Y2H1	464 aa		13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-205	ENST00000586039	GNG14	A0A1W2PPG7	69 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039		A0A1W2PR80	420 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039		B4DSR2	109 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	UROS	P10746	265 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	HSD3B1	P14060	373 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	HSD3B2	P26439	372 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	SHC1	P29353	583 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	SERPINB4	P48594	390 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	TRA2B	P62995	288 aa	Known RBP	13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	ACSM2A	Q08AH3	577 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	UGT3A2	Q3SY77	523 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	KANK2	Q63ZY3	851 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	ACSM2B	Q68CK6	577 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	LRIG3	Q6UXM1	1119 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	THSD4	Q6ZMP0	1018 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	TRIM46	Q7Z4K8	759 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	NUDCD3	Q8IVD9	361 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	OR6Y1	Q8NGX8	325 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	POC1B	Q8TC44	478 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	MGARP	Q8TDB4	240 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	EXOSC8	Q96B26	276 aa	Known RBP	13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	EGLN2	Q96KS0	407 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	PAIP2	Q9BPZ3	127 aa	Known RBP	13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	PSD2	Q9BQI7	771 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	C1QTNF6	Q9BXI9	259 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	C20orf27	Q9GZN8	174 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	CXorf36	Q9H7Y0	433 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	NMRK1	Q9NWW6	199 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	MCM8	Q9UJA3	840 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	TRAF6	Q9Y4K3	522 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	DNAJC15	Q9Y5T4	150 aa		13.59	□□□□□ -0.23
PKN1-205	ENST00000586039	CCT8L1P	A6NM43	557 aa		13.58	□□□□□ -0.24
PKN1-205	ENST00000586039	RGS14	O43566	566 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms