RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ADAMTS16Q8TE57 1224 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 DNAJA4Q8WW22 397 aaPredicted RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 UBL7Q96S82 380 aaPredicted RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 PRR14Q9BWN1 585 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 OR2B2Q9GZK3 357 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 ACER3Q9NUN7 267 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 NDUFAF4Q9P032 175 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 AP4S1Q9Y587 144 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 TRAPPC13A5PLN9 417 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 TPST2O60704 377 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 FKBP6O75344 327 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 OR5F1O95221 314 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 HPNP05981 417 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 PRKCAP17252 672 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 SESN3P58005 492 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 RAET1LQ5VY80 246 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 ULK3Q6PHR2 472 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 FAM83FQ8NEG4 500 aaPredicted RBP16.61■□□□□ 0.25
RFFL-211ENST00000584541 PHF10Q8WUB8 498 aaKnown RBP16.61■□□□□ 0.25
RFFL-211ENST00000584541 PYDC1Q8WXC3 89 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 SLC39A7Q92504 469 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 SLCO4A1Q96BD0 722 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 PIGQQ9BRB3 760 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 FNDC11Q9BVV2 318 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 ARMC1Q9NVT9 282 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 NTNG1Q9Y2I2 539 aa16.61■□□□□ 0.25
RFFL-211ENST00000584541 RPH3AQ9Y2J0 694 aaPredicted RBP16.61■□□□□ 0.25
RFFL-211ENST00000584541 PKD1L2Q7Z442 2459 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 CHD6Q8TD26 2715 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 A0A1B0GWA3 101 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 C7orf72A4D263 438 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 HNRNPRO43390 633 aaKnown RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 MT-ND1P03886 318 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 THRBP10828 461 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 FCGR1AP12314 374 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 ZNF17P17021 662 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 TCEA1P23193 301 aaKnown RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 ADH6P28332 368 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 POLR2HP52434 150 aaKnown RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 SMIM11AP58511 58 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 ST3GAL3Q11203 375 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 MERTKQ12866 999 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 FOXF1Q12946 379 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 PIN1Q13526 163 aaPredicted RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 SLC25A53Q5H9E4 307 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 ALG10BQ5I7T1 473 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 SWT1Q5T5J6 900 aaKnown RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 YRDCQ86U90 279 aaKnown RBP16.6■□□□□ 0.25
RFFL-211ENST00000584541 SLC41A3Q96GZ6 507 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 TAAR6Q96RI8 345 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 PIP5K1AQ99755 562 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 LDAHQ9H6V9 325 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 ACKR4Q9NPB9 350 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 SERINC1Q9NRX5 453 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 RIMS3Q9UJD0 308 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 A4GNTQ9UNA3 340 aa16.6■□□□□ 0.25
RFFL-211ENST00000584541 A0A0B4J2E0 115 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 A0A1B0GX12 115 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ELOA3DA6NLF2 546 aaPredicted RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 J3KTA2 159 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 GNGT2O14610 69 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ADAMDEC1O15204 470 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 CHP2O43745 196 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ZIC3O60481 467 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 DIRAS1O95057 198 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 CST1P01037 141 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 PNMTP11086 282 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 CXCR1P25024 350 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 TACR3P29371 465 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 APOBEC1P41238 236 aaKnown RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 CDH12P55289 794 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 DLX5P56178 289 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ELF3P78545 371 aaPredicted RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 SPIBQ01892 262 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.59■□□□□ 0.25
RFFL-211ENST00000584541 ELOA3BQ3SY89 546 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 WIPI1Q5MNZ9 446 aaPredicted RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 AAGABQ6PD74 315 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 PCSK4Q6UW60 755 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 OFCC1Q8IZS5 231 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 GTPBP8Q8N3Z3 284 aaPredicted RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 Q8NA96 180 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ELOA3Q8NG57 546 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 C3orf49Q96BT1 292 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 SFXN2Q96NB2 322 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ADAM19Q9H013 955 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 DEFB127Q9H1M4 99 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 EXO5Q9H790 373 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ZDHHC11Q9H8X9 412 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 C12orf10Q9HB07 376 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 STOML1Q9UBI4 398 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 ACAD8Q9UKU7 415 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 SLC7A7Q9UM01 511 aa16.59■□□□□ 0.25
RFFL-211ENST00000584541 SPIN1Q9Y657 262 aaPredicted RBP16.59■□□□□ 0.25
RFFL-211ENST00000584541 ATRXP46100 2492 aa16.58■□□□□ 0.25
RFFL-211ENST00000584541 LINC01387J3KSC0 135 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 ETV2O00321 342 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms