RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 COX18Q8N8Q8 333 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 CDRT4Q8N9R6 151 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 OR5D16Q8NGK9 328 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 FAM110BQ8TC76 370 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 RIT1Q92963 219 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 FKBP10Q96AY3 582 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 TAMM41Q96BW9 452 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 NRBF2Q96F24 287 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 COL21A1Q96P44 957 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 TRNT1Q96Q11 434 aaKnown RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 OR1F2PQ96R84 312 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 OR7D2Q96RA2 312 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SLC29A1Q99808 456 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 TREX2Q9BQ50 279 aaPredicted RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 SLX1AQ9BQ83 275 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 MESP1Q9BRJ9 268 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ALOXE3Q9BYJ1 711 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ZNF160Q9HCG1 818 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 BCL2L10Q9HD36 194 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 BATF3Q9NR55 127 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 GIN1Q9NXP7 522 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 KLHL28Q9NXS3 571 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ZNF639Q9UID6 485 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SCOCQ9UIL1 159 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SLC9A8Q9Y2E8 581 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SH3GLB1Q9Y371 365 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 MMACHCQ9Y4U1 282 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 NPFFR2Q9Y5X5 522 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 DNAJB6O75190 326 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 SEMG1P04279 462 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 FPR1P21462 350 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 GALNSP34059 522 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 PTGER1P34995 402 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 STT3AP46977 705 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 KCNJ10P78508 379 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 VLDLRP98155 873 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 MAT1AQ00266 395 aaKnown RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 DUSP2Q05923 314 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 MAP4K2Q12851 820 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 ZNF155Q12901 538 aaPredicted RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 MFAP5Q13361 173 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 SYPL1Q16563 259 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 C6orf52Q5T4I8 152 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 RPUSD3Q6P087 351 aaKnown RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 SHQ1Q6PI26 577 aaKnown RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 SIRT6Q8N6T7 355 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 SMYD1Q8NB12 490 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 OR11G2Q8NGC1 345 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 NR4A3Q92570 626 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 PMM1Q92871 262 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 ANKRD9Q96BM1 317 aaPredicted RBP9.38□□□□□ -0.91
SS18-221ENST00000582448 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 C16orf58Q96GQ5 468 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 ZNF354BQ96LW1 612 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 TAAR6Q96RI8 345 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 LMF1Q96S06 567 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 EPYCQ99645 322 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 PIP5K1AQ99755 562 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 CRB3Q9BUF7 120 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 ADI1Q9BV57 179 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 PIGUQ9H490 435 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 NTN4Q9HB63 628 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 CTSFQ9UBX1 484 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
SS18-221ENST00000582448 FBN2P35556 2912 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 FER1L5A0AVI2 2057 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 A0A1W2PS29 197 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 H0YAE9 185 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 TNFRSF11BO00300 401 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 PCDH17O14917 1159 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 ACOX3O15254 700 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 HS6ST1O60243 411 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 PRAMEF2O60811 474 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
SS18-221ENST00000582448 CDC123O75794 336 aaPredicted RBP9.37□□□□□ -0.91
SS18-221ENST00000582448 MFN2O95140 757 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 H6PDO95479 791 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 FESP07332 822 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 THRBP10828 461 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 RHCEP18577 417 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 RRM2P31350 389 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 KCNJ5P48544 419 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 TDGF1P3P51864 188 aa9.37□□□□□ -0.91
SS18-221ENST00000582448 CHN2P52757 468 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms