RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 P2RX2Q9UBL9 471 aa9.2□□□□□ -0.94
PPP4R1-220ENST00000581835 PACSIN3Q9UKS6 424 aa9.2□□□□□ -0.94
PPP4R1-220ENST00000581835 MCTS1Q9ULC4 181 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-220ENST00000581835 OTOGQ6ZRI0 2925 aa9.2□□□□□ -0.94
PPP4R1-220ENST00000581835 ROS1P08922 2347 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 A0A096LPI6 279 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 GJE1A6NN92 205 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 NR5A2O00482 541 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 ADAM11O75078 769 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SMNDC1O75940 238 aaKnown RBP eCLIP9.19□□□□□ -0.946e-7■■□□□ 13.7
PPP4R1-220ENST00000581835 SYNGR4O95473 234 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CGAP01215 116 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 NCF2P19878 526 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CAPN3P20807 821 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CPA2P48052 419 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SELENBP1Q13228 472 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 RGNQ15493 299 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 TMEM176BQ3YBM2 270 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 AGKQ53H12 422 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 PAGE3Q5JUK9 113 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CMIPQ8IY22 773 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 ARFGAP2Q8N6H7 521 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 ATP6V1C2Q8NEY4 427 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SLC38A5Q8WUX1 472 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 TMEM234Q8WY98 164 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CNOT9Q92600 299 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CPNE4Q96A23 557 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 GMPPAQ96IJ6 420 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SIKE1Q9BRV8 207 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SRXN1Q9BYN0 137 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 OPN3Q9H1Y3 402 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 COQ10BQ9H8M1 238 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 NPHS2Q9NP85 383 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 THUMPD1Q9NXG2 353 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 DNAJB12Q9NXW2 375 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SLC25A37Q9NYZ2 338 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 DCTN4Q9UJW0 460 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 CLEC4AQ9UMR7 237 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 DSPPQ9NZW4 1301 aa9.19□□□□□ -0.94
PPP4R1-220ENST00000581835 MAP1AP78559 2803 aaPredicted RBP9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 A0A1W2PP18 115 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 FAM221AA4D161 298 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 TUBAL3A6NHL2 446 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 CTAG2O75638 210 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 BCHEP06276 602 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 DBIP07108 87 aaKnown RBP9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 NUDT7P0C024 238 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 CD8BP10966 210 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 BMP2P12643 396 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 IL7RP16871 459 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 RYKP34925 604 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 PCYT1AP49585 367 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 CRISP3P54108 245 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 FAM27E3Q08E93 113 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 MERTKQ12866 999 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 FADDQ13158 208 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 GNA13Q14344 377 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ZNF239Q16600 458 aaKnown RBP9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 GTF2IRD2BQ6EKJ0 949 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 C3orf33Q6P1S2 294 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ZNF474Q6S9Z5 364 aaPredicted RBP9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 PLEKHM3Q6ZWE6 761 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 GTF2IRD2Q86UP8 949 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 PEX5LQ8IYB4 626 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ZNF610Q8N9Z0 462 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ZNF563Q8TA94 476 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 LINC01560Q8TB33 94 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 RNF128Q8TEB7 428 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 FAM222BQ8WU58 562 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 WDR60Q8WVS4 1066 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ROBO4Q8WZ75 1007 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 CCDC106Q9BWC9 280 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 RAD21L1Q9H4I0 556 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 RABEP2Q9H5N1 569 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 ZNF385DQ9H6B1 395 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 TIGARQ9NQ88 270 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 PLSCR4Q9NRQ2 329 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 SERINC1Q9NRX5 453 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 GLRX2Q9NS18 164 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 CALML5Q9NZT1 146 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 VAPAQ9P0L0 249 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 GMEB1Q9Y692 573 aa9.18□□□□□ -0.94
PPP4R1-220ENST00000581835 TRBV5-3A0A0A0MS03 114 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 A0A0G2JND7 137 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 A0A0G2JPF8 293 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 A0A1W2PNR3 127 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 CDHR4A6H8M9 788 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 HNRNPCL2B2RXH8 293 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 HNRNPCL3B7ZW38 293 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 AP3D1O14617 1153 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 HNRNPCL1O60812 293 aaKnown RBP9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 SS18L1O75177 396 aaPredicted RBP9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 PLGP00747 810 aaPredicted RBP9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 HNRNPCL4P0DMR1 293 aa9.17□□□□□ -0.94
PPP4R1-220ENST00000581835 EPXP11678 715 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms