RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PIP5K1AQ99755 562 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 TREX2Q9BQ50 279 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 PINK1Q9BXM7 581 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ANGPTL4Q9BY76 406 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF696Q9H7X3 374 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 UBQLN4Q9NRR5 601 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF232Q9UNY5 417 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 MYRFQ9Y2G1 1151 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
CSNK1D-220ENST00000581737 PDZD2O15018 2839 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 APCP25054 2843 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 HIVEP3Q5T1R4 2406 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 C7orf72A4D263 438 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ARRDC5A6NEK1 342 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 SCDO00767 359 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ICOSLGO75144 302 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 MFN2O95140 757 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 IGKV1D-16P01601 117 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 FESP07332 822 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF24P17028 368 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 TBXA2RP21731 343 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ELAVL4P26378 380 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 KCNJ5P48544 419 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 GPR85P60893 370 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PPP2R2BQ00005 443 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PLGLB1Q02325 96 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 LARS2Q15031 903 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ZSWIM7Q19AV6 140 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 FLYWCH1Q4VC44 716 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 CCNJQ5T5M9 372 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 UGT2A3Q6UWM9 527 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 C8orf59Q8N0T1 100 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 CISD2Q8N5K1 135 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 TMEM41AQ96HV5 264 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 C7orf34Q96L11 122 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 FRMD6Q96NE9 622 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 NODALQ96S42 347 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 SDF2Q99470 211 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 MRPS26Q9BYN8 205 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ZNF350Q9GZX5 532 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 PDP1Q9P0J1 537 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 SH3GLB1Q9Y371 365 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 WDR45Q9Y484 360 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 KCNE3Q9Y6H6 103 aa12.3□□□□□ -0.44
CSNK1D-220ENST00000581737 ESPL1Q14674 2120 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 G3V3Y1 287 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 H3BNH8 94 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 TFECO14948 347 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 GADD45GO95257 159 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 OXSR1O95747 527 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 ENDOUP21128 410 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 DNASE1L1P49184 302 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 TTC33Q6PID6 262 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 GALNT10Q86SR1 603 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 MISPQ8IVT2 679 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 GRHL3Q8TE85 626 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 APOL4Q9BPW4 351 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 POLR2J2Q9GZM3 115 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 POLR2J3Q9H1A7 115 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 VCX3AQ9NNX9 186 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 ZFP64Q9NPA5 681 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 DEPPQ9NTK1 212 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 NDUFAF4Q9P032 175 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 NDUFA13Q9P0J0 144 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 NTNG1Q9Y2I2 539 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 WIF1Q9Y5W5 379 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 HSPE1-MOB4S4R3N1 261 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 SVILO95425 2214 aa12.29□□□□□ -0.44
CSNK1D-220ENST00000581737 A0A0G2JMM0 328 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 A0A1W2PPB8 328 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 A0A1W2PQD3 144 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 A0A1W2PRS3 328 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 KIR3DP1A8MWS1 328 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 ALG1L2C9J202 215 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 KIAA0513O60268 411 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 FADS1O60427 444 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 UGT2B17O75795 530 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 CCNB2O95067 398 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 H6PDO95479 791 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 CD247P20963 164 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 PRKAR1BP31321 381 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 ATP12AP54707 1039 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 PMP22Q01453 160 aa12.28□□□□□ -0.44
CSNK1D-220ENST00000581737 ALDH6A1Q02252 535 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms