RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF41P51814 821 aaPredicted RBP14.08□□□□□ -0.16
SS18-216ENST00000580751 EEF1A1P68104 462 aaKnown RBP14.08□□□□□ -0.16
SS18-216ENST00000580751 SKP2Q13309 424 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 GLIPR1L2Q4G1C9 344 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 FBXW10Q5XX13 1052 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 VTCN1Q7Z7D3 282 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 ZNF440Q8IYI8 595 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 FAM86B1Q8N7N1 296 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 FAM83FQ8NEG4 500 aaPredicted RBP14.08□□□□□ -0.16
SS18-216ENST00000580751 GPR32P1Q8NGA4 272 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 OR14L1PQ8NHC6 308 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 ARHGDIGQ99819 225 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 LAT2Q9GZY6 243 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 VCX3BQ9H321 246 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 EXOSC3Q9NQT5 275 aaKnown RBP14.08□□□□□ -0.16
SS18-216ENST00000580751 TAS2R10Q9NYW0 307 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 ICAM5Q9UMF0 924 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 POLEQ07864 2286 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 CDHR4A6H8M9 788 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 OR14I1A6ND48 311 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ANKUB1A6NFN9 424 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 H0Y3Z8 333 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 AQP7O14520 342 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 CASQ2O14958 399 aaPredicted RBP14.07□□□□□ -0.16
SS18-216ENST00000580751 CLOCKO15516 846 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 GMFGO60234 142 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 FMO6PO60774 539 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 BAG2O95816 211 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 NUDT14O95848 222 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 OPN1SWP03999 348 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 RHCEP18577 417 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 IFNA8P32881 189 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ERFP50548 548 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 CCR4P51679 360 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 SMIM11AP58511 58 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 CBFBQ13951 182 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 NRF1Q16656 503 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 NDUFAF6Q330K2 333 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 GLYR1Q49A26 553 aaPredicted RBP14.07□□□□□ -0.16
SS18-216ENST00000580751 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
SS18-216ENST00000580751 CBLN3Q6UW01 205 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ZNF836Q6ZNA1 936 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 CYP4Z1Q86W10 505 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 VRK2Q86Y07 508 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 OR5W2Q8NH69 310 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 NEIL3Q8TAT5 605 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ZBTB8AQ96BR9 441 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ARSGQ96EG1 525 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ZNF300Q96RE9 604 aaPredicted RBP14.07□□□□□ -0.16
SS18-216ENST00000580751 SLC6A15Q9H2J7 730 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 RIMS3Q9UJD0 308 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 SH3GLB1Q9Y371 365 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 FAM32AQ9Y421 112 aaKnown RBP14.07□□□□□ -0.16
SS18-216ENST00000580751 LIPGQ9Y5X9 500 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 ENPP4Q9Y6X5 453 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 DNAJC13O75165 2243 aa14.07□□□□□ -0.16
SS18-216ENST00000580751 NCKAP5O14513 1909 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 HELZ2Q9BYK8 2649 aaKnown RBP14.06□□□□□ -0.16
SS18-216ENST00000580751 A0A1B0GTH9 108 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 ADAMDEC1O15204 470 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 OIP5O43482 229 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 CYP7B1O75881 506 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 UQCRBP14927 111 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 HK1P19367 917 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 SLC6A8P48029 635 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 HSF1Q00613 529 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 IGFBP7Q16270 282 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.06□□□□□ -0.16
SS18-216ENST00000580751 IQCCQ4KMZ1 466 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
SS18-216ENST00000580751 RAET1LQ5VY80 246 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 YRDCQ86U90 279 aaKnown RBP14.06□□□□□ -0.16
SS18-216ENST00000580751 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 NRBF2Q96F24 287 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 SFXN2Q96NB2 322 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 MED17Q9NVC6 651 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
SS18-216ENST00000580751 NDUFAF4Q9P032 175 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 V9GYQ6 96 aa14.06□□□□□ -0.16
SS18-216ENST00000580751 UBR5O95071 2799 aaPredicted RBP14.05□□□□□ -0.16
SS18-216ENST00000580751 C7orf72A4D263 438 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 LINC01387J3KSC0 135 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ZIC3O60481 467 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 TPST1O60507 370 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 TIPRLO75663 272 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 WISP2O76076 250 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ACTL6AO96019 429 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 CST1P01037 141 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ABOP16442 354 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ZNF17P17021 662 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 PGCP20142 388 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 PTGS2P35354 604 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 EIF1P41567 113 aaKnown RBP14.05□□□□□ -0.16
SS18-216ENST00000580751 VLDLRP98155 873 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 PLPPR5Q32ZL2 321 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms