RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 C9orf43Q8TAL5 461 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
RNF43-202ENST00000577625 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RBCK1Q9BYM8 510 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RLIMQ9NVW2 624 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 NLGN3Q9NZ94 848 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 RHCGQ9UBD6 479 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SUSD2Q9UGT4 822 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 ING4Q9UNL4 249 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
RNF43-202ENST00000577625 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 ZNF98A6NK75 572 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 H3BMH7 237 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 EPPINO95925 133 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 LGI1O95970 557 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 HMGN1P05114 100 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 RNH1P13489 461 aaKnown RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 RPS19P39019 145 aaKnown RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 MAP2K6P52564 334 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 LARS2Q15031 903 aaKnown RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 PRICKLE4Q2TBC4 344 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 ATCAYQ86WG3 371 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 CARFQ8N187 725 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 GHDCQ8N2G8 530 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 DOK4Q8TEW6 326 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 SPRTNQ9H040 489 aaPredicted RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 NMNAT1Q9HAN9 279 aaPredicted RBP12.78□□□□□ -0.36
RNF43-202ENST00000577625 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
RNF43-202ENST00000577625 A0A1B0GTQ1 180 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 SYT5O00445 386 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 HRO43593 1189 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 PTP4A3O75365 173 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 SLC43A1O75387 559 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 CD1CP29017 333 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 CLDN20P56880 219 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 ALDH6A1Q02252 535 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 MGAT2Q10469 447 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.77□□□□□ -0.366e-6■■■■□ 22.6
RNF43-202ENST00000577625 EXOSC6Q5RKV6 272 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 DEF8Q6ZN54 512 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 HMGN2P46Q86SG4 172 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 RBM45Q8IUH3 476 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 PIGKQ92643 395 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 SGTBQ96EQ0 304 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 SECISBP2Q96T21 854 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 NIPSNAP1Q9BPW8 284 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 RACGAP1Q9H0H5 632 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 RBFOX1Q9NWB1 397 aaKnown RBP12.77□□□□□ -0.36
RNF43-202ENST00000577625 PRELID3BQ9Y3B1 194 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 HRH3Q9Y5N1 445 aa12.77□□□□□ -0.36
RNF43-202ENST00000577625 FABP12A6NFH5 140 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 M0R3H8 397 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 ORC5O43913 435 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 H1F0P07305 194 aaKnown RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 STSP08842 583 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 CT62P0C5K7 136 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 ACP2P11117 423 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 RAB3AP20336 220 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 NT5EP21589 574 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 EVI2BP34910 448 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 SMIM11AP58511 58 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 RAB14P61106 215 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
RNF43-202ENST00000577625 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 ZNF770Q6IQ21 691 aaPredicted RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 ZCCHC12Q6PEW1 402 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 KLHL17Q6TDP4 642 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 OR6C4Q8NGE1 309 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 ADAMTS18Q8TE60 1221 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 SLC9A6Q92581 669 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 CDS1Q92903 461 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 RIT1Q92963 219 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 CCDC74AQ96AQ1 378 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 PEX11GQ96HA9 241 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 PIGUQ9H490 435 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
RNF43-202ENST00000577625 HEXA-AS1Q9H8Q6 139 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 FANCFQ9NPI8 374 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 SLC39A1Q9NY26 324 aa12.77□□□□□ -0.37
RNF43-202ENST00000577625 PTTG3PQ9NZH4 202 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms