RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 C17orf78Q8N4C9 275 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 CCNYL1Q8N7R7 359 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 SLC25A43Q8WUT9 341 aaPredicted RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 ZNF75CPQ92670 426 aaPredicted RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 ZNF775Q96BV0 537 aaPredicted RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 EGLN2Q96KS0 407 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 GSTO2Q9H4Y5 243 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 ZCCHC3Q9NUD5 404 aaKnown RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 MALT1Q9UDY8 824 aa11.74□□□□□ -0.53
COPS3-214ENST00000577246 SPIN1Q9Y657 262 aaPredicted RBP11.74□□□□□ -0.53
COPS3-214ENST00000577246 A0A087WUV0 522 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 SULT2B1O00204 365 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 ZNF264O43296 627 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 HMGN2P05204 90 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 UBL4AP11441 157 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 PRPH2P23942 346 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 DIO1P49895 249 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 CCR4P51679 360 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 ATP12AP54707 1039 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 FOXA1P55317 472 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 TGFBR3Q03167 851 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 LASP1Q14847 261 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 MLC1Q15049 377 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 QPRTQ15274 297 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 TOMM34Q15785 309 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 EXOSC6Q5RKV6 272 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 ABLIM2Q6H8Q1 611 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 ANKRD26P1Q6NSI1 321 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 TIFABQ6ZNK6 161 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 R3HCC1LQ7Z5L2 792 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 MTDHQ86UE4 582 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 ZNF614Q8N883 585 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 TMEM234Q8WY98 164 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 CDS1Q92903 461 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 C3orf49Q96BT1 292 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 MTERF3Q96E29 417 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 ZMYND19Q96E35 227 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 C16orf58Q96GQ5 468 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 MUS81Q96NY9 551 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 PRR14Q9BWN1 585 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 C12orf65Q9H3J6 166 aaKnown RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 C1orf109Q9NX04 203 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 FBXO9Q9UK97 447 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 FAF1Q9UNN5 650 aaPredicted RBP11.73□□□□□ -0.53
COPS3-214ENST00000577246 AMDHD2Q9Y303 409 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 DTNAQ9Y4J8 743 aa11.73□□□□□ -0.53
COPS3-214ENST00000577246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
COPS3-214ENST00000577246 PRR14LQ5THK1 2151 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 EXOC1LA0A1B0GW35 172 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 NPIPB8E9PQR5 432 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 SLC28A1O00337 649 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 WIPF1O43516 503 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 AKAP10O43572 662 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 MRPL33O75394 65 aaKnown RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 UROSP10746 265 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 NEFHP12036 1026 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 ZNF23P17027 643 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 EDNRAP25101 427 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 FKBP2P26885 142 aaKnown RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 ASMTP46597 345 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 PDE7AQ13946 482 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 GABRA6Q16445 453 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 CARTPTQ16568 116 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 CR1LQ2VPA4 569 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 TIGD2Q4W5G0 525 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 CFAP157Q5JU67 520 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 DCST2Q5T1A1 773 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 CDC73Q6P1J9 531 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 RFWD2Q8NHY2 731 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 ADAMTS15Q8TE58 950 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 FAM120BQ96EK7 910 aaKnown RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
COPS3-214ENST00000577246 ACTRT3Q9BYD9 372 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 PLA2G12AQ9BZM1 189 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 TRAF6Q9Y4K3 522 aa11.72□□□□□ -0.53
COPS3-214ENST00000577246 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 PCNX3Q9H6A9 2034 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 A0A1W2PR80 420 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 OIP5O43482 229 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 DNPH1O43598 174 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 LY6HO94772 140 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 H6PDO95479 791 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 WNT11O96014 354 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 MYL2P10916 166 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 PCMT1P22061 227 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 CASQ1P31415 396 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 RPL3P39023 403 aaKnown RBP11.71□□□□□ -0.53
COPS3-214ENST00000577246 KIAA0040Q15053 153 aa11.71□□□□□ -0.53
COPS3-214ENST00000577246 ZNF385BQ569K4 471 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms