RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 SLC43A2Q8N370 569 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 WDR60Q8WVS4 1066 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 GPATCH1Q9BRR8 931 aaKnown RBP12.4□□□□□ -0.42
NDE1-211ENST00000576502 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 ARMC7Q9H6L4 198 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 TPT1P8Q9HAU6 139 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 ACER3Q9NUN7 267 aa12.4□□□□□ -0.42
NDE1-211ENST00000576502 ABCA4P78363 2273 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 DNAJA2O60884 412 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 NTN1O95631 604 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 OPN1LWP04000 364 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 IL11P20809 199 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 PPIBP23284 216 aaKnown RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 PGM1P36871 562 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 CDKN2CP42773 168 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 AQP5P55064 265 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 SESN3P58005 492 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 KRTAP10-9P60411 292 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 RAC3P60763 192 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 DSTNP60981 165 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 CHRNEQ04844 493 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 MERTKQ12866 999 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 FADDQ13158 208 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 LURAP1LQ8IV03 231 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 PNPT1Q8TCS8 783 aaKnown RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 STON2Q8WXE9 905 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 NINJ1Q92982 152 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 MED18Q9BUE0 208 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
NDE1-211ENST00000576502 SLCO1B3Q9NPD5 702 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 ITGB1BP2Q9UKP3 347 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 TRIM33Q9UPN9 1127 aa12.39□□□□□ -0.43
NDE1-211ENST00000576502 DCHS2Q6V1P9 2916 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 POLQO75417 2590 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 AGAP5A6NIR3 686 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 PRKD3O94806 890 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 PPP3CBP16298 524 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
NDE1-211ENST00000576502 IDH3AP50213 366 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 ATP4BP51164 291 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 MAP2K6P52564 334 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 FUT5Q11128 374 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 SQLEQ14534 574 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
NDE1-211ENST00000576502 GUSBP1Q15486 140 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 TOMM34Q15785 309 aaPredicted RBP12.38□□□□□ -0.43
NDE1-211ENST00000576502 MAPK14Q16539 360 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 SYPL1Q16563 259 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 LIN52Q52LA3 116 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 FCRLAQ7L513 359 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 ANKFN1Q8N957 763 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 RNF128Q8TEB7 428 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 SLC38A1Q9H2H9 487 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 PLSCR4Q9NRQ2 329 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 KLHL9Q9P2J3 617 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 KCNE5Q9UJ90 142 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 ZNF232Q9UNY5 417 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 CORO2BQ9UQ03 480 aa12.38□□□□□ -0.43
NDE1-211ENST00000576502 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 A0A096LPI6 279 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 FAM221AA4D161 298 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 C5orf58C9J3I9 102 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 CGAP01215 116 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 TFPIP10646 304 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 NID1P14543 1247 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 ENPP1P22413 925 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 DNASE1P24855 282 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 RYKP34925 604 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 UGT2B10P36537 528 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 SYT14P1Q58G82 188 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 PLEKHM3Q6ZWE6 761 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 VPS33AQ96AX1 596 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 SPDL1Q96EA4 605 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 OR5B2Q96R09 309 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 NPAS1Q99742 590 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 KLHL13Q9P2N7 655 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 CHRNA9Q9UGM1 479 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 TESMINQ9Y4I5 508 aa12.37□□□□□ -0.43
NDE1-211ENST00000576502 FBN2P35556 2912 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CFAP73A6NFT4 308 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms