RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CD1EP15812 388 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 SSTR2P30874 369 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 RYKP34925 604 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 DLX5P56178 289 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 ZSWIM7Q19AV6 140 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 TMEM176BQ3YBM2 270 aaPredicted RBP21.09■□□□□ 0.97
SNF8-217ENST00000576353 PRAMEF8Q5VWM4 474 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 PRAMEF7Q5VXH5 474 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 PPP4R4Q6NUP7 873 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 OR52P1PQ8NH57 321 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 CNOT9Q92600 299 aaKnown RBP21.09■□□□□ 0.97
SNF8-217ENST00000576353 TMEM19Q96HH6 336 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 VAPAQ9P0L0 249 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.09■□□□□ 0.97
SNF8-217ENST00000576353 ZNF232Q9UNY5 417 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 CELSR2Q9HCU4 2923 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 NBPF19A0A087WUL8 3843 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 TRBV5-3A0A0A0MS03 114 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 BCAS1O75363 584 aaPredicted RBP21.08■□□□□ 0.97
SNF8-217ENST00000576353 MERTKQ12866 999 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 LARS2Q15031 903 aaKnown RBP21.08■□□□□ 0.97
SNF8-217ENST00000576353 LIN52Q52LA3 116 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 KIF18BQ86Y91 864 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 ZNF295-AS1Q8N0V1 137 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 DPP10Q8N608 796 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 CNEP1R1Q8N9A8 125 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 ATP6V1C2Q8NEY4 427 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 C14orf79Q96F83 325 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 BCL2L10Q9HD36 194 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 DNAJB12Q9NXW2 375 aaKnown RBP21.08■□□□□ 0.97
SNF8-217ENST00000576353 KCNN3Q9UGI6 736 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 PRDM4Q9UKN5 801 aa21.08■□□□□ 0.97
SNF8-217ENST00000576353 PKDREJQ9NTG1 2253 aa21.08■□□□□ 0.96
SNF8-217ENST00000576353 KIAA1549Q9HCM3 1950 aa21.08■□□□□ 0.96
SNF8-217ENST00000576353 CRYBG3Q68DQ2 2970 aa21.08■□□□□ 0.96
SNF8-217ENST00000576353 MAST4O15021 2626 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 C5orf58C9J3I9 102 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 AQP8O94778 261 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 NUDT7P0C024 238 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 PABPC4LP0CB38 370 aaKnown RBP21.07■□□□□ 0.96
SNF8-217ENST00000576353 UQCRBP14927 111 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 SLC7A1P30825 629 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 APOBEC1P41238 236 aaKnown RBP21.07■□□□□ 0.96
SNF8-217ENST00000576353 GCNT6Q5T4J0 391 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 MRPL2Q5T653 305 aaKnown RBP21.07■□□□□ 0.96
SNF8-217ENST00000576353 GTF2IRD2BQ6EKJ0 949 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 CGB2Q6NT52 195 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 C3orf33Q6P1S2 294 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 DLEU7Q6UYE1 221 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 PLEKHM3Q6ZWE6 761 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 GTF2IRD2Q86UP8 949 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 ZNF440Q8IYI8 595 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 CPNE4Q96A23 557 aaPredicted RBP21.07■□□□□ 0.96
SNF8-217ENST00000576353 REXO5Q96IC2 774 aaKnown RBP21.07■□□□□ 0.96
SNF8-217ENST00000576353 ARMC7Q9H6L4 198 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 IFT52Q9Y366 437 aa21.07■□□□□ 0.96
SNF8-217ENST00000576353 NAV2Q8IVL1 2488 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 ADGRG4Q8IZF6 3080 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 CFAP73A6NFT4 308 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 MSTNO14793 375 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 PLGP00747 810 aaPredicted RBP21.06■□□□□ 0.96
SNF8-217ENST00000576353 THBS1P07996 1170 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 GPX2P18283 190 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 SHC1P29353 583 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 CPA2P48052 419 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 PLAURQ03405 335 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 RPS26P11Q5JNZ5 115 aaPredicted RBP21.06■□□□□ 0.96
SNF8-217ENST00000576353 GRINAQ7Z429 371 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 DHDDSQ86SQ9 333 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 LUZP2Q86TE4 346 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 VRK2Q86Y07 508 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 BBS10Q8TAM1 723 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 MAL2Q969L2 176 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 STARD4Q96DR4 205 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 DOCK7Q96N67 2140 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 RBM24Q9BX46 236 aaKnown RBP21.06■□□□□ 0.96
SNF8-217ENST00000576353 GLRX2Q9NS18 164 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 KLHL14Q9P2G3 628 aa21.06■□□□□ 0.96
SNF8-217ENST00000576353 SPIN1Q9Y657 262 aaPredicted RBP21.06■□□□□ 0.96
SNF8-217ENST00000576353 CDHR4A6H8M9 788 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 FAAHO00519 579 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 FKBP2P26885 142 aaKnown RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 KIR2DL2P43627 348 aaPredicted RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 KIR2DL3P43628 341 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 HTR3AP46098 478 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 IDH2P48735 452 aaKnown RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 SF3A3Q12874 501 aaKnown RBP eCLIP21.05■□□□□ 0.961e-7■□□□□ 10.6
SNF8-217ENST00000576353 RUNDC3AQ59EK9 446 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 FAM214BQ7L5A3 538 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 SLC25A43Q8WUT9 341 aaPredicted RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 GMPPAQ96IJ6 420 aaPredicted RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 CCDC106Q9BWC9 280 aa21.05■□□□□ 0.96
SNF8-217ENST00000576353 ZNF443Q9Y2A4 671 aaPredicted RBP21.05■□□□□ 0.96
SNF8-217ENST00000576353 INTS1Q8N201 2190 aaKnown RBP21.04■□□□□ 0.96
SNF8-217ENST00000576353 HCFC1P51610 2035 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 A8MXE2 369 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 SMNDC1O75940 238 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNF8-217ENST00000576353 PGM3O95394 542 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 SIRPAP78324 504 aa21.04■□□□□ 0.96
SNF8-217ENST00000576353 SORDQ00796 357 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms