RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MOKQ9UQ07 419 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 MTO1Q9Y2Z2 717 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 NOSIPQ9Y314 301 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 RNF11Q9Y3C5 154 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TNPO3Q9Y5L0 923 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 GPC6Q9Y625 555 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 TEX264Q9Y6I9 313 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 LOC105371242A0A075B767 164 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 A0A0G2JMP0 313 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 A0A0X1KG70 313 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GNG14A0A1W2PPG7 69 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 VSTM5A8MXK1 200 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ZNF195O14628 629 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 CRYAAP02489 173 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 NGFRP08138 427 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 IL3P08700 152 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GSTA2P09210 222 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 NUDT17P0C025 328 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 OR4A8P0C604 315 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 LINGO3P0C6S8 592 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 SAGP10523 405 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 ANPEPP15144 967 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 FPR2P25090 351 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 NTSP30990 170 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GPR6P46095 362 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 CLK1P49759 484 aaKnown RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 NCBP2P52298 156 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMG6-219ENST00000575663 ARL4CP56559 192 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 CSNK2A1P68400 391 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 IL1RL1Q01638 556 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GALNT1Q10472 559 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 RIN1Q13671 783 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 RASA2Q15283 850 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 EFNB3Q15768 340 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GABRA6Q16445 453 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 PFKFB4Q16877 469 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GGTA1PQ4G0N0 100 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 FBLN7Q53RD9 439 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 C3orf33Q6P1S2 294 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 VHLLQ6RSH7 139 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 TMEM107Q6UX40 140 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 LRIG3Q6UXM1 1119 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 APOOLQ6UXV4 268 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 CYS1Q717R9 158 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 C1QL2Q7Z5L3 287 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ISCA2Q86U28 154 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ANKMY2Q8IV38 441 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 OR2L13Q8N349 312 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 C1orf52Q8N6N3 182 aaKnown RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 ZDHHC22Q8N966 263 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ATP6V1C2Q8NEY4 427 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 OR4M2Q8NGB6 313 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 FBXO27Q8NI29 283 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 RHEBL1Q8TAI7 183 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 FBXO30Q8TB52 745 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 UBASH3BQ8TF42 649 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 SELENOMQ8WWX9 145 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ZHX1-C8orf76Q96EF9 292 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 MUS81Q96NY9 551 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 RBBP8Q99708 897 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 CPNE1Q99829 537 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 MCMBPQ9BTE3 642 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 LMF2Q9BU23 707 aaKnown RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 KATNB1Q9BVA0 655 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 TMEM109Q9BVC6 243 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 FUT8Q9BYC5 575 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ROPN1BQ9BZX4 212 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 MMP27Q9H306 513 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 PLK3Q9H4B4 646 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 NOL11Q9H8H0 719 aaKnown RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 ROPN1Q9HAT0 212 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 BRF2Q9HAW0 419 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ESM1Q9NQ30 184 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 SLC52A3Q9NQ40 469 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 SLC35C2Q9NQQ7 365 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 GRHL1Q9NZI5 618 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 RABL2AQ9UBK7 228 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMG6-219ENST00000575663 DCTN4Q9UJW0 460 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 C19orf53Q9UNZ5 99 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 PPIAL4AQ9Y536 164 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 CORINQ9Y5Q5 1042 aa5.13□□□□□ -1.59
SMG6-219ENST00000575663 V9GYY5 206 aaPredicted RBP5.13□□□□□ -1.59
SMG6-219ENST00000575663 A0A1W2PNR3 127 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 A0A1W2PQD3 144 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 C9JVG2 144 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 hCG_2039718K7EN88 272 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 M0QZ24 198 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 UPK1AO00322 258 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 GPR171O14626 319 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 PCDH7O60245 1069 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 MRPL33O75394 65 aaKnown RBP5.12□□□□□ -1.59
SMG6-219ENST00000575663 PSMG1O95456 288 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 HSPA4LO95757 839 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 ITGA5P08648 1049 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 ABHD2P08910 425 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 GAAP10253 952 aa5.12□□□□□ -1.59
SMG6-219ENST00000575663 IMPDH2P12268 514 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms