RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 SESN3P58005 492 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 CHRNEQ04844 493 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 FCRLAQ7L513 359 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 ZNF75CPQ92670 426 aaPredicted RBP23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 ARL8AQ96BM9 186 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 PIK3IP1Q96FE7 263 aa23.24■■□□□ 1.31
NPLOC4-215ENST00000574095 IGHV3-15A0A0B4J1V0 119 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 H6PDO95479 791 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 PGCP20142 388 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 SLC7A1P30825 629 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 SYPL1Q16563 259 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 PDCD4Q53EL6 469 aaKnown RBP23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 AP1ARQ63HQ0 302 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 TUSC5Q8IXB3 177 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 ANKFN1Q8N957 763 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 GLB1L3Q8NCI6 653 aaPredicted RBP23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 PIWIL2Q8TC59 973 aaKnown RBP23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 PNPT1Q8TCS8 783 aaKnown RBP23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 ST8SIA1Q92185 356 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 MBD6Q96DN6 1003 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 OR52B2Q96RD2 323 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 SLC35A3Q9Y2D2 325 aa23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 MAP1AP78559 2803 aaPredicted RBP23.23■■□□□ 1.31
NPLOC4-215ENST00000574095 CLDN24A6NM45 220 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 SLC22A3O75751 556 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 IDO1P14902 403 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 ENPP1P22413 925 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 HPCAP84074 193 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 MERTKQ12866 999 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 RNPS1Q15287 305 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 TMEM201Q5SNT2 666 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 AGBL2Q5U5Z8 902 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 STAC2Q6ZMT1 411 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 BEND4Q6ZU67 534 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 NUFIP2Q7Z417 695 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 FAM71CQ8NEG0 241 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 TMEM234Q8WY98 164 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 ALPK1Q96QP1 1244 aa23.22■■□□□ 1.31
NPLOC4-215ENST00000574095 KLF11O14901 512 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 PRKD3O94806 890 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 RYKP34925 604 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 RAC3P60763 192 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 KCNJ10P78508 379 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 LRRC74AQ0VAA2 488 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 DEFB113Q30KQ7 82 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 COX20Q5RI15 118 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 C3orf33Q6P1S2 294 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 PLEKHM3Q6ZWE6 761 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 STK32CQ86UX6 486 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 OIT3Q8WWZ8 545 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 OR5B2Q96R09 309 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 SERINC1Q9NRX5 453 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 SLC6A13Q9NSD5 602 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 ACER3Q9NUN7 267 aa23.21■■□□□ 1.31
NPLOC4-215ENST00000574095 RFXANKO14593 260 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 IL6P05231 212 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 THBDP07204 575 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 CD53P19397 219 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 DNAJC14Q6Y2X3 702 aaPredicted RBP23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 TGIF2LYQ8IUE0 185 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 ZNF563Q8TA94 476 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 TRNT1Q96Q11 434 aaKnown RBP23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 SLC38A1Q9H2H9 487 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 FANCFQ9NPI8 374 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 KLHL13Q9P2N7 655 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 LIPT1Q9Y234 373 aa23.2■■□□□ 1.3
NPLOC4-215ENST00000574095 FREM1Q5H8C1 2179 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 UBDO15205 165 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 DIAPH2O60879 1101 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 CHRM4P08173 479 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 KLK2P20151 261 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 ANXA11P50995 505 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 PLAURQ03405 335 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 GSTA3Q16772 222 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 CNOT9Q92600 299 aaKnown RBP23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 HS3ST6Q96QI5 342 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 TMUB1Q9BVT8 246 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 ZIM2Q9NZV7 527 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 USH1CQ9Y6N9 552 aa23.19■■□□□ 1.3
NPLOC4-215ENST00000574095 YES1P07947 543 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 CD99P14209 185 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 LRRC74BQ6ZQY2 392 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 SLC43A2Q8N370 569 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 ARFGAP2Q8N6H7 521 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 OR9I1Q8NGQ6 314 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 CTPS2Q9NRF8 586 aa23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 SDR39U1Q9NRG7 319 aaPredicted RBP23.18■■□□□ 1.3
NPLOC4-215ENST00000574095 ZNF469Q96JG9 3925 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 ADAM11O75078 769 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 KRT75O95678 551 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 NR2F1P10589 423 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 PPP3CBP16298 524 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 LOXP28300 417 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 TXNL4AP83876 142 aaKnown RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 TFAP2EQ6VUC0 442 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 CXorf67Q86X51 503 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 ZNF775Q96BV0 537 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 PSD2Q9BQI7 771 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 CCDC106Q9BWC9 280 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms