RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 GUCY1A3Q02108 690 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 KRTAP1-1Q07627 177 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 BCL2A1Q16548 175 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 IKBIPQ70UQ0 350 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 MTDHQ86UE4 582 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 DDIASQ8IXT1 998 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 SAMD14Q8IZD0 417 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 ATP6V1C2Q8NEY4 427 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 OR5D16Q8NGK9 328 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 FAM110BQ8TC76 370 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 PPCDCQ96CD2 204 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 PKNOX2Q96KN3 472 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 PPP1R36Q96LQ0 422 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 MS4A4EQ96PG1 132 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 CCT7Q99832 543 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 REEP4Q9H6H4 257 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 RRAGDQ9NQL2 400 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 BEX4Q9NWD9 120 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 DCDC2Q9UHG0 476 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 ADAM21Q9UKJ8 722 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 GRID1Q9ULK0 1009 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 EIF3LQ9Y262 564 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 ZNF175Q9Y473 711 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 X6R8D5 127 aa8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 CHD3Q12873 2000 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-210ENST00000572824 ATRQ13535 2644 aa8.21□□□□□ -1.09
NPLOC4-210ENST00000572824 C9JVG2 144 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 C16orf97H3BN30 126 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CASKO14936 926 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 SCAMP2O15127 329 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 SMPD2O60906 423 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 C6orf47O95873 294 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 HMGN2P05204 90 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 LINGO3P0C6S8 592 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 NAT1P18440 290 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 PTNP21246 168 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 AGTR1P30556 359 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 GYS2P54840 703 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 MANFP55145 182 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ERVFRD-1P60508 538 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 TP53BP2Q13625 1128 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CAPRIN1Q14444 709 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ZNHIT3Q15649 155 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ACKR1Q16570 336 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 SGCBQ16585 318 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 XKR7Q5GH72 579 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ARL13AQ5H913 290 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 OR2A2Q6IF42 318 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CDC73Q6P1J9 531 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ZNF704Q6ZNC4 412 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CHMP1BQ7LBR1 199 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 BIVMQ86UB2 503 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 LCA5Q86VQ0 697 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CLECL1Q8IZS7 167 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 GTPBP8Q8N3Z3 284 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 COX18Q8N8Q8 333 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 OR2V1Q8NHB1 315 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 LILRB1Q8NHL6 650 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 FAM76AQ8TAV0 307 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 FAM168AQ92567 244 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CHMP6Q96FZ7 201 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ACTR6Q9GZN1 396 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 PTGES2Q9H7Z7 377 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ZCCHC3Q9NUD5 404 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 NTMQ9P121 344 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 KCNE5Q9UJ90 142 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 ING1Q9UK53 422 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 CARD8Q9Y2G2 431 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 STK38LQ9Y2H1 464 aa8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 YLPM1P49750 1951 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-210ENST00000572824 INAFM1C9JVW0 142 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 ITM2AO43736 263 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 SS18L1O75177 396 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 PEX11AO75192 247 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 NDUFS7O75251 213 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 GCM2O75603 506 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 SLU7O95391 586 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 H6PDO95479 791 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 CRHP06850 196 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 HEXAP06865 529 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 TBXA2RP21731 343 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 ENPP1P22413 925 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 GSTM5P46439 218 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 PTH2RP49190 550 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 C17orf67Q0P5P2 114 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 ZNF239Q16600 458 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 CCDC153Q494R4 210 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 HBMQ6B0K9 141 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 TRABD2AQ86V40 505 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 TUSC5Q8IXB3 177 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 ZNF614Q8N883 585 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 BANPQ8N9N5 519 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 CDRT4Q8N9R6 151 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 RFWD2Q8NHY2 731 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 KIF18AQ8NI77 898 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 S100PBPQ96BU1 408 aa8.2□□□□□ -1.1
NPLOC4-210ENST00000572824 APOPT1Q96IL0 206 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms