RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CCL27Q9Y4X3 112 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 EXOC1LA0A1B0GW35 172 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 VWC2LB2RUY7 222 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 PGRP06401 933 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 GSTA1P08263 222 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 SDC1P18827 310 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 CHRNB3Q05901 458 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 QPRTQ15274 297 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 SLC25A53Q5H9E4 307 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 LIPNQ5VXI9 398 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 ABLIM2Q6H8Q1 611 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
CCDC40-206ENST00000572083 STACQ99469 402 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 PIGUQ9H490 435 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 SIRT3Q9NTG7 399 aaPredicted RBP17.43■□□□□ 0.38
CCDC40-206ENST00000572083 ACSS1Q9NUB1 689 aaPredicted RBP17.43■□□□□ 0.38
CCDC40-206ENST00000572083 PMF1-BGLAPU3KQ54 211 aa17.43■□□□□ 0.38
CCDC40-206ENST00000572083 IGHV4-61A0A0C4DH41 118 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 NPIPB8E9PQR5 432 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 TBX19O60806 448 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 BMP4P12644 408 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 GCAP28676 217 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 CASQ1P31415 396 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 NR4A2P43354 598 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 DIO1P49895 249 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 PDLIM4P50479 330 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 FOXG1P55316 489 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-206ENST00000572083 PDE7AQ13946 482 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 SQLEQ14534 574 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 CARTPTQ16568 116 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 TIGD2Q4W5G0 525 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 DCST2Q5T1A1 773 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 CLEC6AQ6EIG7 209 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 TIFABQ6ZNK6 161 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 APH1AQ96BI3 265 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 C1orf159Q96HA4 380 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 CCT7Q99832 543 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 C1orf109Q9NX04 203 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 TAS2R16Q9NYV7 291 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 EMC3Q9P0I2 261 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 BAIAP2L1Q9UHR4 511 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 NOSIPQ9Y314 301 aaKnown RBP17.42■□□□□ 0.38
CCDC40-206ENST00000572083 KCNE3Q9Y6H6 103 aa17.42■□□□□ 0.38
CCDC40-206ENST00000572083 A0A087WUV0 522 aaPredicted RBP17.41■□□□□ 0.38
CCDC40-206ENST00000572083 CBFBQ13951 182 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 FRMD7Q6ZUT3 714 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 LCA5Q86VQ0 697 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 TOR1AIP2Q8NFQ8 470 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 OR5W2Q8NH69 310 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 FBXO17Q96EF6 278 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 DNAJA3Q96EY1 480 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 SORCS2Q96PQ0 1159 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 FMO2Q99518 471 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 HOXD1Q9GZZ0 328 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 ASB6Q9NWX5 421 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 FKBP7Q9Y680 259 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 TENM1Q9UKZ4 2725 aa17.41■□□□□ 0.38
CCDC40-206ENST00000572083 ESPNB1AK53 854 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 G3V2L1 256 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 SULT2B1O00204 365 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 ETV2O00321 342 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-206ENST00000572083 TGFAP01135 160 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 ITGA5P08648 1049 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 UBL4AP11441 157 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 PRPH2P23942 346 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 APOBEC3AP31941 199 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-206ENST00000572083 ATP12AP54707 1039 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 RPL38P63173 70 aaKnown RBP17.4■□□□□ 0.38
CCDC40-206ENST00000572083 GABRA6Q16445 453 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 CR1LQ2VPA4 569 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 C9orf135Q5VTT2 229 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 OR2T11Q8NH01 316 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 METTL2AQ96IZ6 378 aaKnown RBP17.4■□□□□ 0.38
CCDC40-206ENST00000572083 FCRL1Q96LA6 429 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 TRMOQ9BU70 441 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 FKRPQ9H9S5 495 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 EMCNQ9ULC0 261 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 DTNAQ9Y4J8 743 aa17.4■□□□□ 0.38
CCDC40-206ENST00000572083 IGKV3D-15A0A087WSY6 115 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ZNF716A6NP11 495 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ATP6V1G2-DDX39BF2Z307 99 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 NPIPB9F8W1W9 429 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 NDUFS8O00217 210 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ZNF264O43296 627 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 CYP7B1O75881 506 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 UROSP10746 265 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 MYL2P10916 166 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 NTF4P34130 210 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 CSNK2A1P68400 391 aaPredicted RBP17.39■□□□□ 0.37
CCDC40-206ENST00000572083 PHC1P78364 1004 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 SLC25A3Q00325 362 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 TP53BP2Q13625 1128 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 TMPPEQ6ZT21 453 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 OR52E4Q8NGH9 312 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ADAMTS15Q8TE58 950 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 IFT81Q8WYA0 676 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 SOX7Q9BT81 388 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 THUMPD3Q9BV44 507 aaKnown RBP17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ACTRT3Q9BYD9 372 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 PLA2G12AQ9BZM1 189 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms