RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SESN3P58005 492 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 CHRNEQ04844 493 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 MERTKQ12866 999 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 TMEM201Q5SNT2 666 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 OGFOD2Q6N063 350 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 FRRS1Q6ZNA5 592 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 BEND4Q6ZU67 534 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 EIF3MQ7L2H7 374 aaKnown RBP12.25□□□□□ -0.45
RAB40B-204ENST00000571554 CROCCP2Q86T23 111 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 STK32CQ86UX6 486 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-204ENST00000571554 KRTAP1-3Q8IUG1 177 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF619Q8N2I2 560 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 ANKFN1Q8N957 763 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 MIPOL1Q8TD10 442 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 CCDC115Q96NT0 180 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 OR52E6Q96RD3 313 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 PANX1Q96RD7 426 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 ACTR6Q9GZN1 396 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 GLRX2Q9NS18 164 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 THAP1Q9NVV9 213 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 KLHL13Q9P2N7 655 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
RAB40B-204ENST00000571554 HMGN4O00479 90 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 HDAC3O15379 428 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 SNNO75324 88 aaPredicted RBP12.24□□□□□ -0.45
RAB40B-204ENST00000571554 PLAUP00749 431 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 PABPC4LP0CB38 370 aaKnown RBP12.24□□□□□ -0.45
RAB40B-204ENST00000571554 CCNA2P20248 432 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 NF1P21359 2839 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 PGM1P36871 562 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 HPCAP84074 193 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 PLAURQ03405 335 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 RNPS1Q15287 305 aaKnown RBP12.24□□□□□ -0.45
RAB40B-204ENST00000571554 SYPL1Q16563 259 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 SLC9B1Q4ZJI4 515 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 SLC25A53Q5H9E4 307 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 COX20Q5RI15 118 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 GTF2IRD2BQ6EKJ0 949 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 C3orf33Q6P1S2 294 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 TFAP2EQ6VUC0 442 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF621Q6ZSS3 439 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 MAVSQ7Z434 540 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 GTF2IRD2Q86UP8 949 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 KIRREL3Q8IZU9 778 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF563Q8TA94 476 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 ZBTB18Q99592 522 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 NKIRAS1Q9NYS0 192 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 BTNL2Q9UIR0 455 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 GPR45Q9Y5Y3 372 aa12.24□□□□□ -0.45
RAB40B-204ENST00000571554 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 TRPC5OSA6NMA1 111 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 AP3D1O14617 1153 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 SMAD9O15198 467 aaKnown RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 KLF4O43474 513 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ADAM11O75078 769 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PRKD3O94806 890 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 AGR2O95994 175 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PGRP06401 933 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 CHRM4P08173 479 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 TFPIP10646 304 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PGCP20142 388 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 EDNRAP25101 427 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ACKR1Q16570 336 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 FAM71CQ8NEG0 241 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 CNOT9Q92600 299 aaKnown RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 S100PBPQ96BU1 408 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF300Q96RE9 604 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 CCL19Q99731 98 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 SMR3AQ99954 134 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 MANSC1Q9H8J5 431 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 TMBIM4Q9HC24 238 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 CTPS2Q9NRF8 586 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 SLC6A13Q9NSD5 602 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 PRSS50Q9UI38 385 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ING1Q9UK53 422 aaPredicted RBP12.23□□□□□ -0.45
RAB40B-204ENST00000571554 DSCAMO60469 2012 aa12.23□□□□□ -0.45
RAB40B-204ENST00000571554 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-204ENST00000571554 SMPD2O60906 423 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-204ENST00000571554 ADAP00813 363 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 FESP07332 822 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 YES1P07947 543 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 HOXC12P31275 282 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 DIO1P49895 249 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 RAC3P60763 192 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 KCNJ10P78508 379 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 RASGEF1BQ0VAM2 473 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
RAB40B-204ENST00000571554 BEX5Q5H9J7 111 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms