RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 HPXP02790 462 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 CLTBP09497 229 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 LAMP2P13473 410 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SOX9P48436 509 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SNTA1Q13424 505 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 EXOSC2Q13868 293 aaKnown RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 GAB4Q2WGN9 574 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 ARHGAP11BQ3KRB8 267 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SFRP4Q6FHJ7 346 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 FAAH2Q6GMR7 532 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 ASPGQ86U10 573 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 CEP76Q8TAP6 659 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TOX2Q96NM4 488 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TEX101Q9BY14 249 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 HDAC8Q9BY41 377 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SPRTNQ9H040 489 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SERGEFQ9UGK8 458 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 KCNE5Q9UJ90 142 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TBC1D3KA0A087X1G2 549 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TBC1D3FA6NER0 549 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TRABD2BA6NFA1 517 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 RCBTB2O95199 551 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TBC1D3GQ6DHY5 549 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 FIGNL1Q6PIW4 674 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 OR4E2Q8NGC2 313 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 OR51Q1Q8NH59 317 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 OR4C6Q8NH72 309 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 ORAI1Q96D31 301 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 FLVCR2Q9UPI3 526 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SIGLEC7Q9Y286 467 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 RIIAD1A6NNX1 92 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF593O00488 134 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 RNGTTO60942 597 aaKnown RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 NDUFS1P28331 727 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 BMP8BP34820 402 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 MMP15P51511 669 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 CRYZQ08257 329 aaKnown RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 DUSP8Q13202 625 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SUZ12Q15022 739 aaKnown RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 DMKNQ6E0U4 476 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 BMP8AQ7Z5Y6 402 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 CDK20Q8IZL9 346 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 MFSD9Q8NBP5 474 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 RPLP0P6Q8NHW5 317 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF296Q8WUU4 475 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-205ENST00000571272 POF1BQ8WVV4 589 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 PIGKQ92643 395 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 DLL4Q9NR61 685 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 TMEM74BQ9NUR3 256 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 SATB2Q9UPW6 733 aa16.16■□□□□ 0.18
SCARF1-205ENST00000571272 LRRN3E7EW58 273 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 ADRB1P08588 477 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 EPXP11678 715 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 FGL2Q14314 439 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 TRAM1Q15629 374 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 DEFB134Q4QY38 66 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 EIPR1Q53HC9 387 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 IDO2Q6ZQW0 420 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 VN1R4Q7Z5H5 301 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 OR2T35Q8NGX2 323 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF671Q8TAW3 534 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 RAB7BQ96AH8 199 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 ZMYND19Q96E35 227 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-205ENST00000571272 TMEM168Q9H0V1 697 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 CLEC4MQ9H2X3 399 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-205ENST00000571272 LRRN3Q9H3W5 708 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 CAPN10Q9HC96 672 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 MEPEQ9NQ76 525 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-205ENST00000571272 INPP5EQ9NRR6 644 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 SLC35A3Q9Y2D2 325 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 NPFFR2Q9Y5X5 522 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 B8ZZF3 427 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 CFDP00746 253 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-205ENST00000571272 CMPK1P30085 196 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 NRG3P56975 720 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 TAS2R43P59537 309 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 HSF2Q03933 536 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 COL28A1Q2UY09 1125 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 COMMD7Q86VX2 200 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 TMEFF1Q8IYR6 380 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF527Q8NB42 609 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 OR4K14Q8NGD5 310 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 MSANTD3Q96H12 275 aa16.15■□□□□ 0.18
SCARF1-205ENST00000571272 MEIKINA0A087WXM9 373 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 ZNF860A6NHJ4 632 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 FLRT2O43155 660 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 GNRH1P01148 92 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 CD53P19397 219 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 SELENOPP49908 381 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 RPL6Q02878 288 aaKnown RBP16.14■□□□□ 0.17
SCARF1-205ENST00000571272 RPE65Q16518 533 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 GARNL3Q5VVW2 1013 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 HACD4Q5VWC8 232 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 GLRX5Q86SX6 157 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 TNFRSF13CQ96RJ3 184 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 LYARQ9NX58 379 aaKnown RBP16.14■□□□□ 0.17
SCARF1-205ENST00000571272 CXXC1Q9P0U4 656 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-205ENST00000571272 MED31Q9Y3C7 131 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 LYPD3O95274 346 aa16.14■□□□□ 0.17
SCARF1-205ENST00000571272 SULT1A3P0DMM9 295 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms