RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 GSTO2Q9H4Y5 243 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 DDX18Q9NVP1 670 aaKnown RBP9.73□□□□□ -0.85
VPS53-207ENST00000570510 NTMQ9P121 344 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 MCM8Q9UJA3 840 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 ZNF225Q9UK10 706 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 EMCNQ9ULC0 261 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 PCDHB14Q9Y5E9 798 aa9.73□□□□□ -0.85
VPS53-207ENST00000570510 IGHV3-15A0A0B4J1V0 119 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 C7orf72A4D263 438 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 MANBAO00462 879 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 TM9SF1O15321 606 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 NPHS1O60500 1241 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 PGM3O95394 542 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 IFI6P09912 130 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 MYZAPP0CAP1 466 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 UROSP10746 265 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 NEFHP12036 1026 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 DDX5P17844 614 aaKnown RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 ENPP1P22413 925 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 PRPH2P23942 346 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 SLC18A1P54219 525 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 DVL1P1P54792 670 aaPredicted RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 CDH13P55290 713 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 GRAMD1BQ3KR37 738 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 TNFAIP8L3Q5GJ75 292 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 OR7E24Q6IFN5 339 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 THSD4Q6ZMP0 1018 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 GALNT5Q7Z7M9 940 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 C1orf52Q8N6N3 182 aaKnown RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 ZNF433Q8N7K0 673 aaPredicted RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 MRPL24Q96A35 216 aaKnown RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 ZNF764Q96H86 408 aaPredicted RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 RRAGDQ9NQL2 400 aaPredicted RBP9.72□□□□□ -0.85
VPS53-207ENST00000570510 SLC35C2Q9NQQ7 365 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 GRIP1Q9Y3R0 1128 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 TRAF6Q9Y4K3 522 aa9.72□□□□□ -0.85
VPS53-207ENST00000570510 TLDC2A0PJX2 215 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 B4DSR2 109 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 BIRC5O15392 142 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.86
VPS53-207ENST00000570510 RGS14O43566 566 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 RSL1D1O76021 490 aaKnown RBP9.71□□□□□ -0.86
VPS53-207ENST00000570510 CHEK2O96017 543 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 IL3P08700 152 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 COX5AP20674 150 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 ELK4P28324 431 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 GABRA3P34903 492 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 NCBP2P52298 156 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS53-207ENST00000570510 CDH15P55291 814 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 HILS1P60008 231 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 CCNIQ14094 377 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 TMEM107Q6UX40 140 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 APOOLQ6UXV4 268 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 SPATA19Q7Z5L4 167 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 MISPQ8IVT2 679 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 SVOPLQ8N434 492 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 TEX29Q8N6K0 151 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 B4GALNT2Q8NHY0 566 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 GPR151Q8TDV0 419 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 ARL8AQ96BM9 186 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 NPAS1Q99742 590 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 ZNF747Q9BV97 191 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 CXorf36Q9H7Y0 433 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 BCO1Q9HAY6 547 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 ASB6Q9NWX5 421 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 TAS2R7Q9NYW3 318 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 USP22Q9UPT9 525 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 TMED5Q9Y3A6 229 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 SLC25A15Q9Y619 301 aa9.71□□□□□ -0.86
VPS53-207ENST00000570510 A0A087WV62 115 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 ALG1L2C9J202 215 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 SLC28A1O00337 649 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 SCDO00767 359 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 ZNF195O14628 629 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 TYROBPO43914 113 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 OR4F21O95013 312 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 STAMBPO95630 424 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 PDYNP01213 254 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 JUNP05412 331 aaKnown RBP9.7□□□□□ -0.86
VPS53-207ENST00000570510 DAOP14920 347 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 IFNGR1P15260 489 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 PSMA4P25789 261 aaKnown RBP9.7□□□□□ -0.86
VPS53-207ENST00000570510 SHC1P29353 583 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 IL2RGP31785 369 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 SERPINF1P36955 418 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 ACSM2AQ08AH3 577 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 FOXL1Q12952 345 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 SWI5Q1ZZU3 235 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 KRT71Q3SY84 523 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 VPS26BQ4G0F5 336 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 FBXW9Q5XUX1 488 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 ACSM2BQ68CK6 577 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 KLHL24Q6TFL4 600 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 DEF8Q6ZN54 512 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 USP43Q70EL4 1123 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 IKBIPQ70UQ0 350 aa9.7□□□□□ -0.86
VPS53-207ENST00000570510 LRRC34Q8IZ02 419 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms