RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 A0A1W2PQ72 361 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 SAGE2PA6NJ88 616 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 TMEM200CA6NKL6 621 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CCT8L1PA6NM43 557 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 A8MVJ9 347 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 C17orf105B2RV13 164 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 C21orf140B9A014 251 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 FXYD1O00168 92 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 UPK1AO00322 258 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CLDN4O14493 209 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MRASO14807 208 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 SLC22A2O15244 555 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CFLARO15519 480 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 HOXA3O43365 443 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OR10H2O60403 315 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ZNF354AO60765 605 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 PSMG1O95456 288 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 IGKV3-11P04433 115 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 IFNA16P05015 189 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ATP1B1P05026 303 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CHRM4P08173 479 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 SLC35E2P0CK97 266 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 TMEM11P17152 192 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NT5EP21589 574 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MMP11P24347 488 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NTSP30990 170 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 RPL3P39023 403 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 EMDP50402 254 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MVDP53602 400 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OR4D2P58180 307 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 TIRAPP58753 221 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 IRX1P78414 480 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ALKBH1Q13686 389 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CAPRIN1Q14444 709 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 LRIF1Q5T3J3 769 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 FAM90A2PQ658T7 463 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 C8orf82Q6P1X6 216 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 TMEM88Q6PEY1 159 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 PAPD4Q6PIY7 484 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 C16orf47Q6ZP98 133 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OLIG3Q7RTU3 272 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NUP54Q7Z3B4 507 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 LINC00346Q8IVM7 164 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ST13P4Q8IZP2 240 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 FAM9CQ8IZT9 166 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 LRRC25Q8N386 305 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 APCDD1LQ8NCL9 501 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ZNF248Q8NDW4 579 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OR4A15Q8NGL6 344 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 RP9Q8TA86 221 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 PSMA8Q8TAA3 256 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 PNPT1Q8TCS8 783 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ZNF675Q8TD23 568 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ZFP90Q8TF47 636 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 KCNE4Q8WWG9 221 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 RAB40AQ8WXH6 277 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OR5P2Q8WZ92 322 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 STARD8Q92502 1023 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 RIT1Q92963 219 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NCLNQ969V3 563 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 GIMAP5Q96F15 307 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 AURKBQ96GD4 344 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MAGED4Q96JG8 741 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 IMMP1LQ96LU5 166 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 KLHL15Q96M94 604 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 DGAT2Q96PD7 388 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CPPED1Q9BRF8 314 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 SEMA4CQ9C0C4 833 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MMADHCQ9H3L0 296 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 LIN28AQ9H9Z2 209 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ZNF160Q9HCG1 818 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 CPNE5Q9HCH3 593 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ACSS1Q9NUB1 689 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ATAD3AQ9NVI7 634 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 MRPS18AQ9NVS2 196 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 FAM120CQ9NX05 1096 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 TAS2R9Q9NYW1 312 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 BTNL2Q9UIR0 455 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 LEF1Q9UJU2 399 aaPredicted RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 OSGIN1Q9UJX0 560 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NXT1Q9UKK6 140 aaKnown RBP4.85□□□□□ -1.63
SIN3A-215ENST00000570124 PADI2Q9Y2J8 665 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 NDUFAF1Q9Y375 327 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
SIN3A-215ENST00000570124 ANKRD11Q6UB99 2663 aaPredicted RBP4.84□□□□□ -1.63
SIN3A-215ENST00000570124 SVILO95425 2214 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 RNF103-CHMP3A0A140T963 221 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 PSMD9O00233 223 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 PLOD2O00469 737 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 NME4O00746 187 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 RFXANKO14593 260 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 AIM2O14862 343 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 ANGPT2O15123 496 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 PAGE4O60829 102 aa4.84□□□□□ -1.63
SIN3A-215ENST00000570124 SORBS2O94875 1100 aaKnown RBP4.84□□□□□ -1.63
SIN3A-215ENST00000570124 IGHEP01854 428 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms