RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CD1EP15812 388 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CPOXP36551 454 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CARD18P57730 90 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 SESN3P58005 492 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 IRX1P78414 480 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TMEM176BQ3YBM2 270 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 LRIF1Q5T3J3 769 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 C3orf33Q6P1S2 294 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF474Q6S9Z5 364 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 PLEKHM3Q6ZWE6 761 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 FAM214BQ7L5A3 538 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TMEM200AQ86VY9 491 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 MSRB3Q8IXL7 192 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CMIPQ8IY22 773 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 ATP6V1C2Q8NEY4 427 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 RNF128Q8TEB7 428 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 WDR60Q8WVS4 1066 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TMEM234Q8WY98 164 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CNOT9Q92600 299 aaKnown RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 PMM1Q92871 262 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 OSTF1Q92882 214 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 GPATCH1Q9BRR8 931 aaKnown RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF385DQ9H6B1 395 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 NPHS2Q9NP85 383 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 ACER3Q9NUN7 267 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TMEM45AQ9NWC5 275 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 DNAJB12Q9NXW2 375 aaKnown RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 SLC25A37Q9NYZ2 338 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CLEC4AQ9UMR7 237 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 HRNRQ86YZ3 2850 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 ANKRD17O75179 2603 aaKnown RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 TRBV5-3A0A0A0MS03 114 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 FAM221AA4D161 298 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 A6NNC1 897 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 CLIC1O00299 241 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 CTAG2O75638 210 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 DBIP07108 87 aaKnown RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 BMP2P12643 396 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 RYKP34925 604 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 PCYT1AP49585 367 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 CRISP3P54108 245 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 MERTKQ12866 999 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 RGNQ15493 299 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 AGKQ53H12 422 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 RPS26P11Q5JNZ5 115 aaPredicted RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 PAGE3Q5JUK9 113 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 MRPL2Q5T653 305 aaKnown RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 ARFGAP2Q8N6H7 521 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 OR6K3Q8NGY3 331 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 SLC38A5Q8WUX1 472 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 ROBO4Q8WZ75 1007 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 SIKE1Q9BRV8 207 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 MTHFD2LQ9H903 347 aaPredicted RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 TIGARQ9NQ88 270 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 THUMPD1Q9NXG2 353 aaKnown RBP11.65□□□□□ -0.54
CNOT1-220ENST00000569916 CALML5Q9NZT1 146 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 SLAMF8Q9P0V8 285 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 DCTN4Q9UJW0 460 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 PROCRQ9UNN8 238 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
CNOT1-220ENST00000569916 POLQO75417 2590 aa11.65□□□□□ -0.55
CNOT1-220ENST00000569916 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 AP3D1O14617 1153 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 PLGP00747 810 aaPredicted RBP11.64□□□□□ -0.55
CNOT1-220ENST00000569916 NUDT7P0C024 238 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 EPXP11678 715 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 IL7RP16871 459 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 AGTR1P30556 359 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 SLC7A1P30825 629 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 CCKARP32238 428 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 CD79BP40259 229 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 FAM27E3Q08E93 113 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 FADDQ13158 208 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF836Q6ZNA1 936 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 CDH24Q86UP0 819 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 OR5B2Q96R09 309 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 RAD21L1Q9H4I0 556 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 CTPS2Q9NRF8 586 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 GLRX2Q9NS18 164 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 RASSF1Q9NS23 344 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 VAPAQ9P0L0 249 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 GMEB1Q9Y692 573 aa11.64□□□□□ -0.55
CNOT1-220ENST00000569916 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 MPDZO75970 2070 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 A0A0G2JND7 137 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 A0A1W2PP18 115 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 SH3D21A4FU49 640 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 CDHR4A6H8M9 788 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 FAAHO00519 579 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms