RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	C4BPB	P20851	252 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	AKT2	P31751	481 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	STAR	P49675	285 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	GAS1	P54826	345 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	TAS2R50	P59544	299 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	TDG	Q13569	410 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SLC5A12	Q1EHB4	618 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	MPEG1	Q2M385	716 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	ALG11	Q2TAA5	492 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	NHLRC3	Q5JS37	347 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	WASH2P	Q6VEQ5	465 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	B3GLCT	Q6Y288	498 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	RASSF6	Q6ZTQ3	369 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	KANSL1	Q7Z3B3	1105 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	RD3	Q7Z3Z2	195 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	ZNF687	Q8N1G0	1237 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	OR5M3	Q8NGP4	307 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	F2RL3	Q96RI0	385 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SLC6A20	Q9NP91	592 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	LHX9	Q9NQ69	397 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	C2orf42	Q9NWW7	574 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	EDAR	Q9UNE0	448 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	HEBP2	Q9Y5Z4	205 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820		A6NCN8	305 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	DNASE2	O00115	360 aa	Predicted RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	RTCA	O00442	366 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	OR1F1	O43749	312 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	LCMT2	O60294	686 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	IL3	P08700	152 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	H2AFB1	P0C5Y9	115 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	H2AFB2	P0C5Z0	115 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	LIMS3	P0CW19	117 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	LIMS4	P0CW20	117 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	CEL	P19835	753 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	RBMS1	P29558	406 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	BSG	P35613	385 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	CD79B	P40259	229 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	PITPNB	P48739	271 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SRP9	P49458	86 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	RAB8A	P61006	207 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	YPEL5	P62699	121 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	INSL4	Q14641	139 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	GINS1	Q14691	196 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SMAD2	Q15796	467 aa	Known RBP	11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	PRSS53	Q2L4Q9	553 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	PABPC1L2A	Q5JQF8	200 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	ZNF425	Q6IV72	752 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	IKBIP	Q70UQ0	350 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SHF	Q7M4L6	423 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	FGD2	Q7Z6J4	655 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	MMP21	Q8N119	569 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	MS4A3	Q96HJ5	214 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	ZNF251	Q9BRH9	671 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	BIN3	Q9NQY0	253 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	SPHK1	Q9NYA1	384 aa		11.13	□□□□□ -0.63
SPG7-222	ENST00000569820	MDC1	Q14676	2089 aa	Known RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	CD8B2	A6NJW9	211 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820		H7C2Y5	167 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	PRODH	O43272	600 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	IFNA4	P05014	189 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	FCER2	P06734	321 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	CD8B	P10966	210 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	GIF	P27352	417 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	SOAT1	P35610	550 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	MTNR1A	P48039	350 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	LGALS3BP	Q08380	585 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	OPCML	Q14982	345 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	ST3GAL2	Q16842	350 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	GSG1	Q2KHT4	349 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	HACD4	Q5VWC8	232 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	LYPD4	Q6UWN0	246 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	DEF8	Q6ZN54	512 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	ADCK2	Q7Z695	626 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	NKAIN4	Q8IVV8	208 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	GPR135	Q8IZ08	494 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	SLC22A18AS	Q8N1D0	253 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	BEST4	Q8NFU0	473 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	OR2L3	Q8NG85	312 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	APOBEC4	Q8WW27	367 aa	Known RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	ADAMTS14	Q8WXS8	1223 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	PPCDC	Q96CD2	204 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	SPRTN	Q9H040	489 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	PRDM9	Q9NQV7	894 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	MRPS18A	Q9NVS2	196 aa	Known RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	NDRG3	Q9UGV2	375 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	GPN3	Q9UHW5	284 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	POMT2	Q9UKY4	750 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	CYP8B1	Q9UNU6	501 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	MPTX1	A8MV57	137 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820		A8MXK9	166 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	SOX1	O00570	391 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	NDUFS4	O43181	175 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	NME6	O75414	186 aa	Predicted RBP	11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	RASGRP1	O95267	797 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	OR12D1	P0DN82	309 aa		11.12	□□□□□ -0.63
SPG7-222	ENST00000569820	RPL3	P39023	403 aa	Known RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms