RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PTPRQQ9UMZ3 2332 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRP4O75096 1905 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CACNA1DQ01668 2161 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC162PA2VCL2 907 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GSAPA4D1B5 854 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 E9PBE3 544 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ARPC2O15144 300 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 AP2A2O94973 939 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR4F21O95013 312 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SYNGR4O95473 234 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SERPINA3P01011 423 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CALCAP01258 141 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 IGLV3-19P01714 112 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RAF1P04049 648 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPIP06744 558 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZDHHC11BP0C7U3 371 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GIMD1P0DJR0 217 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CALB2P22676 271 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RBMS1P29558 406 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 FCGR2BP31994 310 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PSMD8P48556 350 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC1A6P48664 564 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 STK19P49842 368 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PDX1P52945 283 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 AIF1P55008 147 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNNC1P63316 161 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RPP38P78345 283 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 IRX1P78414 480 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CDR2Q01850 454 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ENPP2Q13822 863 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RCN1Q15293 331 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CST6Q15828 149 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CDKN3Q16667 212 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PHKG1Q16816 387 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ISXQ2M1V0 245 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ANKRD55Q3KP44 614 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 FILIP1LQ4L180 1135 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 AGKQ53H12 422 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 C1orf185Q5T7R7 199 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 NKAIN2Q5VXU1 208 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR4A47Q6IF82 309 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SPOPLQ6IQ16 392 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PWWP2BQ6NUJ5 590 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RFWD3Q6PCD5 774 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRRC70Q7Z2Q7 622 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SCD5Q86SK9 330 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PRUNE1Q86TP1 453 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 PIGZQ86VD9 579 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZFAND4Q86XD8 727 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 STK40Q8N2I9 435 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPD1LQ8N335 351 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 BBS5Q8N3I7 341 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRRC17Q8N6Y2 441 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRRC52Q8N7C0 313 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM184AQ8NB25 1140 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 TMEM178AQ8NBL3 297 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 NOA1Q8NC60 698 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAPK1IP1LQ8NDC0 245 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CHPT1Q8WUD6 406 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GLYATL1Q969I3 302 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRPL53Q96EL3 112 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 NSL1Q96IY1 281 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CXorf58Q96LI9 332 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPR137Q96N19 417 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACCSQ96QU6 501 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAP3K3Q99759 626 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 OMDQ99983 421 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC77Q9BR77 488 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 TBCDQ9BTW9 1192 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 TIPINQ9BVW5 301 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 CALN1Q9BXU9 219 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ELOVL4Q9GZR5 314 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 C10orf88Q9H8K7 445 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 GDF3Q9NR23 364 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 SDR39U1Q9NRG7 319 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 DDX28Q9NUL7 540 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACOXLQ9NUZ1 547 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 IL37Q9NZH6 218 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 FLRT3Q9NZU0 649 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 NCKAP1Q9Y2A7 1128 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRPS7Q9Y2R9 242 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 STYXL1Q9Y6J8 313 aa2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF106Q9H2Y7 1883 aaKnown RBP2.86□□□□□ -1.95
HMGB1P6-201ENST00000569046 RP1P56715 2156 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 RELNP78509 3460 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 IGHV4-4A0A075B6R2 117 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 A0A087WW49 117 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 A0A1W2PN81 502 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 NCF1BA6NI72 391 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF233A6NK53 670 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 ANKRD30BLA7E2S9 258 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 NCF1CA8MVU1 366 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 FAM25EA8MYX2 175 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 EEF2KO00418 725 aaKnown RBP2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 PDXKO00764 312 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC31A1O15431 190 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 MED7O43513 233 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 SYT7O43581 403 aa2.85□□□□□ -1.95
HMGB1P6-201ENST00000569046 DFNA5O60443 496 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms