RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 SORBS1Q9BX66 1292 aaKnown RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 C3orf14Q9HBI5 128 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PRDM7Q9NQW5 492 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PTGFRNQ9P2B2 879 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 CRNNQ9UBG3 495 aaPredicted RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 POLEQ07864 2286 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 A0A0G2JN53 185 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 TRBV4-1A0A0J9YWV2 114 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 LOC110117498-PIK3R3F6TDL0 507 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 B4GALT2O60909 372 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 TSFMP43897 325 aaKnown RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 COPZ1P61923 177 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PRR30Q53SZ7 412 aaPredicted RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 H3F3CQ6NXT2 135 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 TNFAIP8L2Q6P589 184 aaPredicted RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 CASP12Q6UXS9 341 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 QSOX2Q6ZRP7 698 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 LINC00696Q6ZRV3 163 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 UBE3DQ7Z6J8 389 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 SLC22A16Q86VW1 577 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 MMP21Q8N119 569 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 CADM3Q8N126 398 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 FAM26EQ8N5C1 309 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 SIRT6Q8N6T7 355 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PROKR2Q8NFJ6 384 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 M1APQ8TC57 530 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PIK3R3Q92569 461 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 HAS2Q92819 552 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 SNRNP40Q96DI7 357 aaKnown RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 TMEM80Q96HE8 168 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 PTCHD1Q96NR3 888 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 TREX2Q9BQ50 279 aaPredicted RBP10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 OR51E2Q9H255 320 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 ARMC7Q9H6L4 198 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 SEC14L3Q9UDX4 400 aa10.67□□□□□ -0.7
SNAPC5-208ENST00000568875 SVILO95425 2214 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 IGKV3D-11A0A0A0MRZ8 115 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 IRGMA1A4Y4 181 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 TMPRSS11DO60235 418 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 OR10H3O60404 316 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 DBTP11182 482 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 POU2F1P14859 743 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 GRK5P34947 590 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 KHKP50053 298 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 XKP51811 444 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 CRISP3P54108 245 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 CYP27C1Q4G0S4 372 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 B3GNTL1Q67FW5 361 aaPredicted RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 PGBD2Q6P3X8 592 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 CISD2Q8N5K1 135 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 GALNT11Q8NCW6 608 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 CHAC2Q8WUX2 184 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 SLC35G5Q96KT7 338 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 AMDHD1Q96NU7 426 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 SERINC2Q96SA4 455 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 LPAR4Q99677 370 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 POLDIP3Q9BY77 421 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 POLR2J3Q9H1A7 115 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 SLC35C2Q9NQQ7 365 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 MRPS18AQ9NVS2 196 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 SEC14L4Q9UDX3 406 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 TRAPPC4Q9Y296 219 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 SLC9A8Q9Y2E8 581 aa10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 LSM2Q9Y333 95 aaKnown RBP10.66□□□□□ -0.7
SNAPC5-208ENST00000568875 HIVEP3Q5T1R4 2406 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 HECTD1Q9ULT8 2610 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 A0A0G2JPF8 293 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 TCRBV16S1A1N1A0A5B0 115 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 HNRNPCL2B2RXH8 293 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 HNRNPCL3B7ZW38 293 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 RTCAO00442 366 aaKnown RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 CYR61O00622 381 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 B3GALT2O43825 422 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 SEMA7AO75326 666 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 ENTPD6O75354 484 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 UGT2B17O75795 530 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 HNRNPCL4P0DMR1 293 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 GSTM3P21266 225 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 MAOAP21397 527 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 ZNF10P21506 573 aaPredicted RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 NTSP30990 170 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 DEFA1P59665 94 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 DEFA3P59666 94 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 HSPB3Q12988 150 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 SEC23BQ15437 767 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 SPHARQ15513 63 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 MED22Q15528 200 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 EXT1Q16394 746 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 BTBD16Q32M84 506 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 RPS26P11Q5JNZ5 115 aaPredicted RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 PAPD4Q6PIY7 484 aaKnown RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 CCDC190Q86UF4 302 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 SRFBP1Q8NEF9 429 aaKnown RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 CHCHD6Q9BRQ6 235 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 MND1Q9BWT6 205 aa10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 C6orf62Q9GZU0 229 aaPredicted RBP10.65□□□□□ -0.7
SNAPC5-208ENST00000568875 MMP25Q9NPA2 562 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms