RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ALPK2Q86TB3 2170 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 A0A0G2JPF8 293 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CDHR4A6H8M9 788 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GJE1A6NN92 205 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HNRNPCL2B2RXH8 293 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HNRNPCL3B7ZW38 293 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 EIF1AYO14602 144 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 TNFSF11O14788 317 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HNRNPCL1O60812 293 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 DBIP07108 87 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 THBS1P07996 1170 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HNRNPCL4P0DMR1 293 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ETFAP13804 333 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ETS2P15036 469 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 PGCP20142 388 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 TCEA1P23193 301 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ME2P23368 584 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 APOBEC1P41238 236 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ACAA2P42765 397 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 KIR2DL3P43628 341 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 EIF1AXP47813 144 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 AGFG1P52594 562 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CARD18P57730 90 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 STX1BP61266 288 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF239Q16600 458 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GTDC1Q4AE62 458 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 TIGD2Q4W5G0 525 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GPAT3Q53EU6 434 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 PDSS1Q5T2R2 415 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 RNF220Q5VTB9 566 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HBMQ6B0K9 141 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 VWA1Q6PCB0 445 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC2A7Q6PXP3 512 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF474Q6S9Z5 364 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 PLEKHM3Q6ZWE6 761 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ADGRG3Q86Y34 549 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GCNT2Q8N0V5 402 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 OR6K3Q8NGY3 331 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 RFWD2Q8NHY2 731 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 RNF128Q8TEB7 428 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC25A43Q8WUT9 341 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CPNE4Q96A23 557 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 DACH2Q96NX9 599 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 RBM24Q9BX46 236 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 QRSL1Q9H0R6 528 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 OR10A4Q9H209 315 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 RAD21L1Q9H4I0 556 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 HEATR1Q9H583 2144 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM38AQ9H6F2 299 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 BCO1Q9HAY6 547 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 A4GALTQ9NPC4 353 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 TIGARQ9NQ88 270 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 GALNT8Q9NY28 637 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CRIM1Q9NZV1 1036 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CCDC167Q9P0B6 97 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 VAPAQ9P0L0 249 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 P2RX2Q9UBL9 471 aa7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 PRRC2AP48634 2157 aaKnown RBP7.32□□□□□ -1.24
HDGFL3-205ENST00000568129 CLDN24A6NM45 220 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 SEC14L5O43304 696 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF208O43345 1280 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 DNPH1O43598 174 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CXCL13O43927 109 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 GMFGO60234 142 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 FZD7O75084 574 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 PABPC4LP0CB38 370 aaKnown RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 UBTFL6P0CB48 400 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ARAFP10398 606 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 NR2F1P10589 423 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 PPIBP23284 216 aaKnown RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 UQCRC1P31930 480 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CD79BP40259 229 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 HTR3AP46098 478 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CRISP3P54108 245 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 DSTNP60981 165 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 H3F3AP84243 136 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 EPS8Q12929 822 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 GNA13Q14344 377 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 PDK3Q15120 406 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 RNPS1Q15287 305 aaKnown RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 TESK1Q15569 626 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ADRM1Q16186 407 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 SGCBQ16585 318 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 TMEM176BQ3YBM2 270 aaPredicted RBP7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 RUNDC3AQ59EK9 446 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CGB2Q6NT52 195 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 C3orf33Q6P1S2 294 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 OTOGQ6ZRI0 2925 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 TMPPEQ6ZT21 453 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 GRINAQ7Z429 371 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 P4HA3Q7Z4N8 544 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 PEX5LQ8IYB4 626 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF440Q8IYI8 595 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 SLC43A2Q8N370 569 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ARFGAP2Q8N6H7 521 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 ZNF610Q8N9Z0 462 aa7.31□□□□□ -1.24
HDGFL3-205ENST00000568129 CNOT9Q92600 299 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms