RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 UGT2B15P54855 530 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CDH12P55289 794 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SUMO3P55854 103 aaPredicted RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 TMPRSS3P57727 454 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CDK3Q00526 305 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 RELAQ04206 551 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CDC20Q12834 499 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ITGADQ13349 1161 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ILKQ13418 452 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 C1DQ13901 141 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 IRF3Q14653 427 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 NCF4Q15080 339 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 INAQ16352 499 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SLC5A12Q1EHB4 618 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 LRRC73Q5JTD7 316 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 DCST1Q5T197 706 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 C9orf64Q5T6V5 341 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 AGAP7PQ5VUJ5 663 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 FRMPD2BQ6IN97 320 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 PNCKQ6P2M8 343 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CASP12Q6UXS9 341 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CEACAM20Q6UY09 585 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 PLEKHG7Q6ZR37 379 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SLC46A3Q7Z3Q1 461 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 IGFN1Q86VF2 1251 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 RNF130Q86XS8 419 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 EGFL6Q8IUX8 553 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 IZUMO1Q8IYV9 350 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SLC5A8Q8N695 610 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 AQP11Q8NBQ7 271 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 OR4K1Q8NGD4 311 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 OR8J1Q8NGP2 316 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 MCFD2Q8NI22 146 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 NFKBIDQ8NI38 313 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SFXN5Q8TD22 340 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF675Q8TD23 568 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 TFGQ92734 400 aaPredicted RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 MAL2Q969L2 176 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ITFG2Q969R8 447 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SPSB4Q96A44 273 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 RSPRY1Q96DX4 576 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF354BQ96LW1 612 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 TIMM29Q9BSF4 260 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 WRAP53Q9BUR4 548 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 CCDC32Q9BV29 185 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SARGQ9BW04 601 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 MS4A8Q9BY19 250 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SLIRPQ9GZT3 109 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 DSN1Q9H410 356 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ANKRD19PQ9H560 264 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 DDX31Q9H8H2 851 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 C3orf14Q9HBI5 128 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 KRCC1Q9NPI7 259 aaPredicted RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ACER3Q9NUN7 267 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 GIMAP4Q9NUV9 329 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 RHBDL2Q9NX52 303 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 IL17BQ9UHF5 180 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 ACAD8Q9UKU7 415 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 EXO1Q9UQ84 846 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 SCN8AQ9UQD0 1980 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 LRRK2Q5S007 2527 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 DSPPQ9NZW4 1301 aa4.9□□□□□ -1.63
CAPN3-217ENST00000567817 TNRC6BQ9UPQ9 1833 aaKnown RBP4.9□□□□□ -1.63
CAPN3-217ENST00000567817 DOPEY1Q5JWR5 2465 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PTPRBP23467 1997 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 A0A075B6Q4 140 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 A0A1W2PRQ8 180 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 AGAP5A6NIR3 686 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CGB1A6NKQ9 187 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 VSTM5A8MXK1 200 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 LOC110117498-PIK3R3F6TDL0 507 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TNFSF14O43557 240 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 UGT2B17O75795 530 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 UPK1BO75841 260 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 SOX30O94993 753 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 DIRAS1O95057 198 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 MFN2O95140 757 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 APOA1P02647 267 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 H1F0P07305 194 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TFPTP0C1Z6 253 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ADORA3P0DMS8 318 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 ACADMP11310 421 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CHMP24386 653 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PSMA1P25786 263 aaKnown RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 NDUFS1P28331 727 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PDHA2P29803 388 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 AQP1P29972 269 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 PBLDP30039 288 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 NTSP30990 170 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CSTF2P33240 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
CAPN3-217ENST00000567817 IDUAP35475 653 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 AHRP35869 848 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TGFBR2P37173 567 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 MAP2K4P45985 399 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 CAPZA2P47755 286 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 RGS6P49758 472 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 RAB28P51157 221 aa4.89□□□□□ -1.63
CAPN3-217ENST00000567817 TLE3Q04726 772 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms