RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	NCBP2	P52298	156 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	ARL4C	P56559	192 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	TGFBR3	Q03167	851 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	POU4F2	Q12837	409 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	TMEM139	Q8IV31	216 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	MMGT1	Q8N4V1	131 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	FBXO36	Q8NEA4	188 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	OR52E4	Q8NGH9	312 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	SELENOM	Q8WWX9	145 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	C22orf15	Q8WYQ4	148 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	CDKL2	Q92772	493 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	MRGPRX4	Q96LA9	322 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	OR5B2	Q96R09	309 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	CCT8L2	Q96SF2	557 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	SHCBP1L	Q9BZQ2	653 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	BRF2	Q9HAW0	419 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	G6PC2	Q9NQR9	355 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	FARSB	Q9NSD9	589 aa	Known RBP	11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	UPB1	Q9UBR1	384 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737	NFU1	Q9UMS0	254 aa		11.93	□□□□□ -0.5
SMG1-213	ENST00000567737		A0A0G2JMP0	313 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737		A0A0X1KG70	313 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	GNG14	A0A1W2PPG7	69 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	SH3PXD2B	A1X283	911 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	PRSS23	O95084	383 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	PDYN	P01213	254 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	ADRA2C	P18825	462 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	PDK3	Q15120	406 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	CD226	Q15762	336 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	METTL2B	Q6P1Q9	378 aa	Known RBP	11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	C1QL4	Q86Z23	238 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	OR2L13	Q8N349	312 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	OR4M2	Q8NGB6	313 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	CEP70	Q8NHQ1	597 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	RHEBL1	Q8TAI7	183 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	DUX5	Q96PT3	197 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	SLC38A2	Q96QD8	506 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	CPNE1	Q99829	537 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	KATNB1	Q9BVA0	655 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	C1QTNF5	Q9BXJ0	243 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	TMPRSS13	Q9BYE2	586 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	UBQLN4	Q9NRR5	601 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	DCTN4	Q9UJW0	460 aa		11.92	□□□□□ -0.5
SMG1-213	ENST00000567737	IGKV3D-15	A0A087WSY6	115 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	IGHV1-18	A0A0C4DH31	117 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737		A0A1W2PQD3	144 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	MYO1G	B0I1T2	1018 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737		J3QLI3	93 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737		M0QZ24	198 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	GPR171	O14626	319 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	PCDH7	O60245	1069 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	MYBPC1	Q00872	1141 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	TRADD	Q15628	312 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	VPS26B	Q4G0F5	336 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	ZNF311	Q5JNZ3	666 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	ABLIM2	Q6H8Q1	611 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	GALNT18	Q6P9A2	607 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	SPATA21	Q7Z572	469 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	CMC1	Q7Z7K0	106 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	SIGLECL1	Q8N7X8	197 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	ARL8A	Q96BM9	186 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	MS4A14	Q96JA4	679 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	DOK1	Q99704	481 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	RACGAP1	Q9H0H5	632 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	TPK1	Q9H3S4	243 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	EQTN	Q9NQ60	294 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	CPSF2	Q9P2I0	782 aa	Known RBP	11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	SNX6	Q9UNH7	406 aa		11.91	□□□□□ -0.5
SMG1-213	ENST00000567737	DNAJC9-AS1	A6NH13	148 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	PDLIM1	O00151	329 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	PRKCA	P17252	672 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	NPR2	P20594	1047 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	RBMX	P38159	391 aa	Known RBP	11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	P2RX1	P51575	399 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	SUMO3	P55854	103 aa	Predicted RBP	11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	CSNK2A1	P68400	391 aa	Predicted RBP	11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	ZNF117	Q03924	483 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	ZP4	Q12836	540 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	PDIA2	Q13087	525 aa	Known RBP	11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	TRAF3	Q13114	568 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	FASTKD3	Q14CZ7	662 aa	Known RBP	11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	GGTA1P	Q4G0N0	100 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	C3orf33	Q6P1S2	294 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	CARM1	Q86X55	608 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	SYT14	Q8NB59	555 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	OR4F15	Q8NGB8	312 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	OR4F6	Q8NGB9	312 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	OR6Y1	Q8NGX8	325 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	FBXO30	Q8TB52	745 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	PHOSPHO1	Q8TCT1	267 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	ELP4	Q96EB1	424 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	ZNF442	Q9H7R0	627 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	VPS29	Q9UBQ0	182 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	ACTL7B	Q9Y614	415 aa		11.9	□□□□□ -0.5
SMG1-213	ENST00000567737	CCDC189	A1A4V9	331 aa		11.89	□□□□□ -0.51
SMG1-213	ENST00000567737	ZNF716	A6NP11	495 aa		11.89	□□□□□ -0.51
SMG1-213	ENST00000567737	CXorf49	A8MYA2	514 aa	Predicted RBP	11.89	□□□□□ -0.51
SMG1-213	ENST00000567737	KLF11	O14901	512 aa		11.89	□□□□□ -0.51
SMG1-213	ENST00000567737	WNT9B	O14905	357 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms