RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 KIR2DL3P43628 341 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 CAV2P51636 162 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRRT3Q5FWE3 981 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 SLC18B1Q6NT16 456 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF679Q8IYX0 411 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRRT1Q99946 306 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 TMEM175Q9BSA9 504 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 SRRQ9GZT4 340 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 CDCP1Q9H5V8 836 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 PGAP2Q9UHJ9 254 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 CAMK2AQ9UQM7 478 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 Q9Y3F1 56 aa11.62□□□□□ -0.55
CSPG4P13-202ENST00000567704 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 IGFBP1P08833 259 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TAS2R19P59542 299 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 PRSS36Q5K4E3 855 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 AWAT2Q6E213 333 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TMUB2Q71RG4 321 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ANGPTL6Q8NI99 470 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF587Q96SQ5 575 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TCEAL2Q9H3H9 227 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 LRFN1Q9P244 771 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 PPT2Q9UMR5 302 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF705FA8MVS1 300 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TAPBPO15533 448 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 SRPX2O60687 465 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 AK1P00568 194 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF705DP0CH99 300 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF705BP0CI00 300 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 RAB5CP51148 216 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPLD1P80108 840 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 EIF2B1Q14232 305 aaKnown RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 BEND4Q6ZU67 534 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 NLRC3Q7RTR2 1065 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPAT4Q86UL3 456 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ARPC5LQ9BPX5 153 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 CA5BQ9Y2D0 317 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 VEGFDO43915 354 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 SSX4O60224 188 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 MPIG6BO95866 241 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 CTSCP53634 463 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GALK2Q01415 458 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GAB1Q13480 694 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TEAD2Q15562 447 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 LRIF1Q5T3J3 769 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF322Q6U7Q0 402 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GPR155Q7Z3F1 870 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TOMM40LQ969M1 308 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 GFOD1Q9NXC2 390 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 FBXL12Q9NXK8 326 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ASB1Q9Y576 335 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TTLL8A6PVC2 850 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 M0QZQ0 153 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 LGALS8O00214 317 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 CCNJQ5T5M9 372 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 PGAP1Q75T13 922 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 METTL27Q8N6F8 245 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 OR10R2Q8NGX6 335 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 KLHL15Q96M94 604 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 NKX6-2Q9C056 277 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF768Q9H5H4 540 aaKnown RBP11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 TOGARAM1Q9Y4F4 1720 aa11.61□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZBTB42B2RXF5 422 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CCR9P51686 369 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 CHRNEQ04844 493 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 AANATQ16613 207 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 GGTA1PQ4G0N0 100 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 KIAA0319Q5VV43 1072 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF709Q8N972 641 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZNF385DQ9H6B1 395 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 FBRSQ9HAH7 460 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 BACE2Q9Y5Z0 518 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 NINQ8N4C6 2090 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 A0A1B0GTL3 188 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 RHPN2P1A8MT19 583 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 H3BUI4 141 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SOCS7O14512 581 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 PHYHO14832 338 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 GABRB1P18505 474 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 IL1RNP18510 177 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 IRF4Q15306 451 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 DUSP7Q16829 419 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 HEPHL1Q6MZM0 1159 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 H3F3CQ6NXT2 135 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 ZC3H14Q6PJT7 736 aaKnown RBP11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 MARC2Q969Z3 335 aa11.6□□□□□ -0.55
CSPG4P13-202ENST00000567704 OPALINQ96PE5 141 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms