RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SHC1P29353 583 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 PRKAR1BP31321 381 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 TIMP3P35625 211 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 SLC6A8P48029 635 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
RNF40-211ENST00000567365 PMPCAQ10713 525 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 EPS8Q12929 822 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 MMEL1Q495T6 779 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 LIN52Q52LA3 116 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 DHRS4L2Q6PKH6 230 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 XKRXQ6PP77 449 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 LACC1Q8IV20 430 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 SLC15A3Q8IY34 581 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 NAXEQ8NCW5 288 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 FBXO27Q8NI29 283 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 GID8Q9NWU2 228 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 CMTM6Q9NX76 183 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 Q9UFV3 132 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 USP22Q9UPT9 525 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 RNF6Q9Y252 685 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 IFT52Q9Y366 437 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 A0A0J9YW62 118 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 CLCA1A8K7I4 914 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 TMEM229AB2RXF0 380 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 H3BML4 177 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 TPST1O60507 370 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 MFN2O95140 757 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 TGM6O95932 706 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 PRG2P13727 222 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 CCR4P51679 360 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ZNF136P52737 540 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 SMSP52788 366 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 DMTNQ08495 405 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ART3Q13508 389 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 LARS2Q15031 903 aaKnown RBP11.16□□□□□ -0.62
RNF40-211ENST00000567365 SF3B4Q15427 424 aaKnown RBP eCLIP11.16□□□□□ -0.626e-7■■■■■ 34.5
RNF40-211ENST00000567365 CYP51A1Q16850 503 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 VMACQ2NL98 169 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 GLIPR1L2Q4G1C9 344 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 PLEKHM3Q6ZWE6 761 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ZNF440Q8IYI8 595 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 TMCO5AQ8N6Q1 288 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 RND1Q92730 232 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 REXO5Q96IC2 774 aaKnown RBP11.16□□□□□ -0.62
RNF40-211ENST00000567365 SH3GL1Q99961 368 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ADAM19Q9H013 955 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 COQ10BQ9H8M1 238 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ALKBH4Q9NXW9 302 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ABCD2Q9UBJ2 740 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 DCHS2Q6V1P9 2916 aa11.16□□□□□ -0.62
RNF40-211ENST00000567365 CFAP73A6NFT4 308 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 C5orf58C9J3I9 102 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 FAM47E-STBD1D6RA91 191 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 H0Y3Z8 333 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 NME4O00746 187 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 AIM2O14862 343 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 CYP7B1O75881 506 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 DCTN3O75935 186 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 NUDT14O95848 222 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 GKN3PP0CG01 181 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 SRYQ05066 204 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 SELENBP1Q13228 472 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 VEZF1Q14119 521 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 GUSBP1Q15486 140 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ZNF311Q5JNZ3 666 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 PLXDC2Q6UX71 529 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ESPNLQ6ZVH7 1005 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 GRINAQ7Z429 371 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ARPINQ7Z6K5 226 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ADGRG3Q86Y34 549 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
RNF40-211ENST00000567365 LIX1LQ8IVB5 337 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 SLC30A8Q8IWU4 369 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 LILRA2Q8N149 483 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ACBD4Q8NC06 268 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 GPR32P1Q8NGA4 272 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 LILRB4Q8NHJ6 448 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 WNT2BQ93097 391 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 TAMM41Q96BW9 452 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ZNF845Q96IR2 970 aaPredicted RBP11.15□□□□□ -0.62
RNF40-211ENST00000567365 KLHL15Q96M94 604 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
RNF40-211ENST00000567365 WFDC6Q9BQY6 131 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 ARL8BQ9NVJ2 186 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 GMPR2Q9P2T1 348 aaKnown RBP11.15□□□□□ -0.62
RNF40-211ENST00000567365 PLEKHB1Q9UF11 243 aaPredicted RBP11.15□□□□□ -0.62
RNF40-211ENST00000567365 ZNF175Q9Y473 711 aa11.15□□□□□ -0.62
RNF40-211ENST00000567365 HCFC1P51610 2035 aa11.14□□□□□ -0.63
RNF40-211ENST00000567365 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms